Rattus norvegicus (rat): 311245 Help Entry 311245            CDS       T01003                                  Symbol Traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism rno  Rattus norvegicus (rat) Pathway rno04010   MAPK signaling pathway rno04064   NF-kappa B signaling pathway rno04120   Ubiquitin mediated proteolysis rno04140   Autophagy - animal rno04144   Endocytosis rno04380   Osteoclast differentiation rno04620   Toll-like receptor signaling pathway rno04621   NOD-like receptor signaling pathway rno04622   RIG-I-like receptor signaling pathway rno04657   IL-17 signaling pathway rno04722   Neurotrophin signaling pathway rno04936   Alcoholic liver disease rno05132   Salmonella infection rno05133   Pertussis rno05135   Yersinia infection rno05140   Leishmaniasis rno05142   Chagas disease rno05145   Toxoplasmosis rno05152   Tuberculosis rno05160   Hepatitis C rno05161   Hepatitis B rno05162   Measles rno05168   Herpes simplex virus 1 infection rno05169   Epstein-Barr virus infection rno05170   Human immunodeficiency virus 1 infection rno05171   Coronavirus disease - COVID-19 rno05200   Pathways in cancer rno05222   Small cell lung cancer rno05235   PD-L1 expression and PD-1 checkpoint pathway in cancer rno05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:rno00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     311245 (Traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     311245 (Traf6)    04064 NF-kappa B signaling pathway     311245 (Traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     311245 (Traf6)    04140 Autophagy - animal     311245 (Traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     311245 (Traf6)    04621 NOD-like receptor signaling pathway     311245 (Traf6)    04622 RIG-I-like receptor signaling pathway     311245 (Traf6)    04657 IL-17 signaling pathway     311245 (Traf6)   09156 Nervous system    04722 Neurotrophin signaling pathway     311245 (Traf6)   09158 Development and regeneration    04380 Osteoclast differentiation     311245 (Traf6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     311245 (Traf6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     311245 (Traf6)   09162 Cancer: specific types    05222 Small cell lung cancer     311245 (Traf6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     311245 (Traf6)    05161 Hepatitis B     311245 (Traf6)    05160 Hepatitis C     311245 (Traf6)    05171 Coronavirus disease - COVID-19     311245 (Traf6)    05162 Measles     311245 (Traf6)    05168 Herpes simplex virus 1 infection     311245 (Traf6)    05169 Epstein-Barr virus infection     311245 (Traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     311245 (Traf6)    05135 Yersinia infection     311245 (Traf6)    05133 Pertussis     311245 (Traf6)    05152 Tuberculosis     311245 (Traf6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     311245 (Traf6)    05140 Leishmaniasis     311245 (Traf6)    05142 Chagas disease     311245 (Traf6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     311245 (Traf6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     311245 (Traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rno04131]     311245 (Traf6)    04121 Ubiquitin system [BR:rno04121]     311245 (Traf6) Enzymes [BR:rno01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      311245 (Traf6) Membrane trafficking [BR:rno04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     311245 (Traf6) Ubiquitin system [BR:rno04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     311245 (Traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 SlyX DUF4455 PspA_IM30 TRAF3_RING U-box zf-RING_11 RING_XB3-XBAT31 DUF16 Spc29 UPF0242 DUF7310 Filament EzrA TACC_C TMF_DNA_bd ADIP PUMA_CC Motif Other DBs NCBI-GeneID:  311245 NCBI-ProteinID:  NP_001101224 RGD:  1306853 Ensembl:  ENSRNOG00000004639 UniProt:  B5DF45 LinkDB All DBs Position 3:108418537..108443330 Genome browser AA seq 530 aa AA seqDB search MSLLNCENSCASSQSSSDCCAAMANSCSAAMKDDSVSGCVSTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACITKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLTVKCPNKGCVQKMELRHLEDHQVHCEFALVICPQCQRFFQKCQINKHIIE DCPRRQVSCVNCAVPMPYEEKEIHDQSCPLANIICEYCGTILIREQMPNHYDLDCPTAPV PCTFSVFGCHEKMQRNHLARHLQENTQLHMRLLAQAVHNVNLSLRPCDASSPSRGCRPED PNYEETVKQLEGRLVRQDHQIRELTAKMETQSMHVSELKRTIRSLEDKVAEMEAQQCNGI YIWKIGNFGMHLKSQEEERPVVIHSPGFYTGRPGYKLCMRLHLQLPTAQRCANYISLFVH TMQGEYDSHLPWPFQGTIRLTILDQSEAVIRQNHEEVMDAKPELLAFQRPTIPRNPKGFG YVTFMHLEALRQGTFIKDDTLLVRCEVSTRFDMGGLRKEGFQPRSTDAGV NT seq 1593 nt NT seq  +upstreamnt  +downstreamnt atgagtctcttaaactgtgaaaacagctgtgcgtccagccagtcttcaagcgactgctgt gctgccatggccaactcctgcagtgctgccatgaaagatgacagtgtgagtggctgtgtc agcacggggaacctgtccagctccttcatggaggagatccagggatatgatgtggagttt gacccacctttggaaagcaagtatgagtgccccatctgcttgatggctttacgggaagca gtgcaaacaccatgtggccacaggttctgcaaagcctgcatcaccaagtccataagggat gcaggtcacaagtgcccagttgacaatgaaatactgctggaaaatcaactgtttcctgac aattttgcaaagcgagagattctttccctgacggtaaagtgtccaaataaaggctgtgtg caaaagatggagctgagacatctcgaggatcatcaagtacattgtgaattcgctctagtg atttgtccccaatgccaacgttttttccaaaagtgccagattaataaacacattatcgag gattgtcccaggagacaggtttcttgtgtaaactgtgctgtgcccatgccgtatgaagag aaagagatccacgatcaaagctgtcctctggcaaatatcatctgtgaatactgtggtaca atcctcataagagaacagatgcctaatcattatgatctagactgcccaacagctccagtc ccctgcacattcagtgtgtttggctgtcacgaaaagatgcagaggaatcacttggcacgg cacttgcaagagaacacccagttgcacatgagactgttggcccaggctgttcataatgtt aacctctctttgcggccatgcgatgcctcctctccatcccggggatgtcgtcctgaggac ccaaattatgaggaaacggtcaaacagttggaggggcgcctagtaagacaggaccatcaa atccgggagctgaccgccaaaatggaaacgcagagcatgcatgtgagcgagctcaagcgg accattcgaagcctcgaggacaaagttgccgagatggaagcacagcagtgtaatggcatt tacatttggaagattggcaactttgggatgcacttgaaatcccaagaagaggaaagacct gtggtcattcatagccctggattctacacaggcagacctgggtacaagctgtgcatgcgc ctgcacctccagctaccgacggctcagcgctgtgcaaactacatttccctctttgtccac acaatgcaaggagagtatgacagccacctcccctggcccttccagggtacaatacgcctc acgatccttgatcagtctgaagcagtaataaggcaaaaccacgaagaggtcatggatgct aagccagaactgcttgcctttcagcggcccaccatcccacggaaccccaaaggttttggc tatgtgacattcatgcacctggaagccttaagacagggaaccttcatcaaggatgatacg ttattagtgcgctgtgaagtctctacccgctttgacatggggggccttcggaaggagggg ttccagccacggagtactgatgcaggcgtgtag

DBGET integrated database retrieval system