KEGG   Rattus norvegicus (rat): 315084
Entry
315084            CDS       T01003                                 
Symbol
Gsdmd
Name
(RefSeq) gasdermin-D
  KO
K20917  gasdermin-D
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04613  Neutrophil extracellular trap formation
rno04621  NOD-like receptor signaling pathway
rno04623  Cytosolic DNA-sensing pathway
rno05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    315084 (Gsdmd)
   04621 NOD-like receptor signaling pathway
    315084 (Gsdmd)
   04623 Cytosolic DNA-sensing pathway
    315084 (Gsdmd)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    315084 (Gsdmd)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rno02000]
    315084 (Gsdmd)
Transporters [BR:rno02000]
 Other transporters
  Pores ion channels [TC:1]
   315084 (Gsdmd)
SSDB
Motif
Pfam: Gasdermin Gasdermin_C nSTAND_NTPase5
Other DBs
NCBI-GeneID: 315084
NCBI-ProteinID: NP_001387922
RGD: 1307261
Ensembl: ENSRNOG00000007728
Vega: OTTRNOG00000000275
UniProt: A6HS22 A0A096MJ11
LinkDB
Position
7:109423209..109427771
AA seq 488 aa
MPSAFAGVVKNVIKEVGGSGGELIPVDCLRNSTSFKPYCLLSRKLSSSWFWKPRYTCVNL
SIKDILEPSAPEPEPECFGNFQVSDVVDGNIQGSVTLSGTGQGKISGGAAVSGSSSASMN
VCMLRVTQQTWEIMQRERHLQQPENKILQQLRNRGDDVFVVTEVLQTKEEVQITQVHSHE
GSGQFTLPGASCLQGEGKGHQSRKKMVTIPAGSILAFRVAQLLIGSEWDILLISNEKKRT
FELPSSGHKGAVGQRRHDFSLLAVLHSIGERLSLKSDGTNEEEVIREDFQGLRAEVEAGS
SELRSLEMELRQQLLVDIGRILQDQPSMEALEASLEQGLCSGEQVEPLEGPAGSILECLV
LDSGELVPELAAPVFYLLGALAGLSETQQQLLATKALEATVLSKELELVKHVLEQSTPWQ
EQRSVPLPSRLLGDSWDEEALTWVLLEECGLTLQVEPPQVYWEPTSQGPICALYASLALL
SSLGQKSC
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgccgtcagcctttgcgggagtggtcaagaatgtgatcaaagaggtgggcggcagcgga
ggagagctcatcccagtggactgccttcggaattctaccagcttcaagccctactgcctc
ctgagcaggaaactctcaagctcatggttctggaaaccccgttatacatgtgtcaacctg
tcaatcaaggacatcctggagcccagtgctccagaaccagaaccggagtgttttggcaac
ttccaagtctccgatgtcgtcgatgggaacattcagggcagtgtgacgttgtcaggcacg
ggacaagggaaaatttctggtggggctgcagtgtctggcagttccagtgcctccatgaat
gtgtgtatgctgcgtgtgactcagcagacctgggagatcatgcaacgtgaaaggcacctg
cagcagcctgaaaacaaaatcctgcaacagctgcggaatcgtggggatgacgtgtttgtg
gtgaccgaggtgctgcagacaaaggaggaggtgcagatcacccaggtccacagccacgag
ggctcaggccagttcacactgcctggagcctcgtgcttgcagggtgaaggcaagggccac
caaagccggaagaagatggtgaccattcctgcaggcagcatccttgcattccgagtggcc
cagctgctcattggctctgaatgggatattcttctcatctcaaatgagaaaaagaggacc
tttgagctgccctcctcaggccacaaaggagcagtgggccagaggcggcatgactttagt
ctgcttgccgtactccattccatcggggagcggctgagtctcaagtcagatggaaccaat
gaggaagaagtaatcagggaagacttccaaggcctgcgtgcggaggtggaggcaggctct
tcagaactgcggagcttagaaatggagttgagacaacagctactagtagacatcgggagg
attttacaggaccagcccagcatggaagccttagaggcctcactagagcagggtctgtgc
agtggtgagcaggtagagcctctggaaggcccagcaggcagcatccttgagtgtctggtg
ctcgactctggagaactggtgccggaacttgcagcccccgtcttctacctgttgggagca
ctggctgggttgagtgaaacccagcagcagctactggctactaaggctctggaggcaacg
gtgctgtcaaaggagctagagttggtgaagcacgtcttggaacagagcaccccatggcag
gagcagagatctgtgcccctgccctccaggctccttggggacagctgggatgaggaggct
ctcacctgggtcttgctagaagaatgtggcctaacgctgcaggtggaacccccccaggta
tactgggaaccaacatctcagggccccatatgtgcactctatgcctccctggccctattg
tcaagtctaggccagaaatcgtgttag

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