Rattus norvegicus (rat): 315137
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Entry
315137 CDS
T01003
Symbol
Apobec3
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC3
KO
K18750
C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03250
Viral life cycle - HIV-1
rno05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
315137 (Apobec3)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
315137 (Apobec3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
315137 (Apobec3)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
315137 (Apobec3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NAD2
APOBEC2
NAD1
APOBEC_N
SNAD4
APOBEC3
APOBEC_C
APOBEC4_like
APOBEC4
APOBEC1
dCMP_cyt_deam_1
Toxin-deaminase
MafB19-deam
Motif
Other DBs
NCBI-GeneID:
315137
NCBI-ProteinID:
NP_001028875
RGD:
1307800
Ensembl:
ENSRNOG00000016852
UniProt:
Q3T1K0
LinkDB
All DBs
Position
7:113314196..113333306
Genome browser
AA seq
385 aa
AA seq
DB search
MGPVCLGCSHRRPYSPIRNPLKKLYQQTFYFHFKNVRYAWGRKNNFLCYEVNGMDCALPV
PLRQGVFRKQGHIHAELCFIYWFHDKVLRVLSPMEEFKVTWYMSWSPCSKCAEQVARFLA
AHRNLSLAIFSSRLYYYLRNPNYQQKLCRLIQEGVHVAAMDLPEFKKCWNKFVDNDGQPF
RPWMRLRINFSFYDCKLQEIFSRMNLLREDVFYLQFNNSHRVKPVQNRYYRRKSYLCYQL
ERANGQEPLKGYLLYKKGEQHVEILFLEKMRSMELSQVRITCYLTWSPCPNCARQLAAFK
KDHPDLILRIYTSRLYFYWRKKFQKGLCTLWRSGIHVDVMDLPQFADCWTNFVNPQRPFR
PWNELEKNSWRIQRRLRRIKESWGL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgggaccagtgtgcctgggatgcagccatcgcagaccctattcaccgatcagaaacccg
ctaaagaagttatatcaacaaacattctactttcattttaagaacgtacgctatgcctgg
ggtcgaaagaataacttcttgtgctatgaagtgaatgggatggactgcgctttacctgtc
ccccttcgccaaggggtcttcaggaaacagggccacatccacgccgaactctgcttcata
tactggttccacgacaaagtcctgagagtgctgtccccgatggaagagttcaaggtcacg
tggtacatgtcctggagcccctgcagcaagtgcgcggagcaggtagccaggttcctggcc
gcacaccgcaacctaagcctggccatcttcagctcccgcttgtactactacttaaggaac
ccgaactaccagcagaagctctgcaggctgattcaggaaggagtccacgtggctgccatg
gacctaccagaatttaaaaagtgttggaacaagtttgtggacaatgacggccaaccattc
aggccttggatgagactgagaataaattttagtttctatgattgcaagcttcaggagatt
ttcagccgaatgaatctgctaagggaagatgtattttacttgcaatttaacaacagccac
cgggtcaagccagtccagaatcgctactatcgcaggaagtcctatctgtgctaccaactg
gagcgggccaatggccaagagccactcaaaggctacctgctatacaagaaaggtgaacag
catgtagaaatcctcttccttgagaagatgcggtccatggagctgagccaagtgcgaatt
acctgctacctcacctggagcccctgcccaaactgtgcccggcaactcgctgcattcaaa
aaggatcacccagacctaattctgcggatctatacctcccgcctgtatttctactggagg
aagaagttccagaaggggctgtgtactctgtggcgatcagggatccacgtggacgtcatg
gacctccctcagtttgctgactgctggacaaactttgtgaacccgcaaaggccctttagg
ccatggaatgaactggagaaaaacagctggcgcatacaaaggcggctccggaggatcaag
gagtcctggggcctgtaa
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