Rattus norvegicus (rat): 365844
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Entry
365844 CDS
T01003
Symbol
Nup210l
Name
(RefSeq) nuclear pore membrane glycoprotein 210-like
KO
K14314
nuclear pore complex protein Nup210
Organism
rno
Rattus norvegicus (rat)
Pathway
rno03013
Nucleocytoplasmic transport
rno05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
365844 (Nup210l)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
365844 (Nup210l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rno03019
]
365844 (Nup210l)
Messenger RNA biogenesis [BR:
rno03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
365844 (Nup210l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_3rd
Ig_NUP210_7th
Ig_NUP210_6th
Ig_NUP210_9th
Ig_NUP210_1st
Ig_NUP210_4th
NUP210_Ig
Big_2
T2SS-T3SS_pil_N
HupF_HypC
Motif
Other DBs
NCBI-GeneID:
365844
NCBI-ProteinID:
NP_001178829
RGD:
1310250
Ensembl:
ENSRNOG00000055790
LinkDB
All DBs
Position
2:177843647..177962975
Genome browser
AA seq
1881 aa
AA seq
DB search
MIAFGAPRPRGFRLLFSLTPHHFFLFLIGTLANKLNVPQVLLPFSREPGRVPFLLEAQRG
CYIWHSTQHDAVAIQPLYENGTSCSQRAVLVAESTQPIRLSSIILAREVVTDHELRCDVK
VDVIDNIEIVSRTRELYVDDAPLELMVRALDSKGNTFSTLAGMVFEWSIAQDKESSREEL
SSKIRILNYSEAEYSPPDYITEMEKEEKQGDVILVSGMRTGAAVVKVRIHEPFYKKVAAA
LIRLLVLENIFLIPSHDTYLLVGAYMKYRVAKMVQGRMTEGKFPLEHYTLELQDHRLIDV
GLRSGTVALLDEKTAMVTALQLGQTNLVFVHKNVHMRSVSGLPNSTIYVVEPGFLGFTIH
PGGRWSLEVGQVYIITVEVFDKSSTRVYISDNLKITFQFSKEYFEEQLSTLNGSYHMVKA
LKDGAVVINASLTSSLWESNSSQPKTYQINHQQEVKIYFPIQLKPSFLAFPHYPLGISNR
FTVQVEGGSGNFTWSSSNETVAMVTTKGVVTAGQVRGNSTILARDVQNPFRSGNIKVYVM
KLNKMELLPFQADVEIGQIIEVPIAMYHVNTETKEAIAFTDCSHLPLDLNSDKQGVFTLF
KEGIQKPGPMHCSSVHIAATSPGHTLVTISVTGHEEHVWSSATFAAYEPLKALNPVEVAL
VTWHSVKEMVFEGGPHPWILEPSRFFLELSMEKAEAIRITEVRLPAKRKQNQYVYRVLCL
ELGEQVLTLRIGNHPGVLNPSPSVEKVQVRFICAHPASMLVTPMYKVPAGTQPCPLPQYN
KQLIPVSSVRDTVLELAVFDQHGRKFDNFSSLMLEWKSSNETLARFESPKSVEMVARDDG
SGQTRLHGHQILEVHQIKGTVLIGVNFAGYSGKRSPKGISNSPRSAGVELLLVEDVTVQP
ENATIYNHPDVKEVFNLVEGSGYFLVNSSEQDIVTTTYMESEGSVQLVPAHPGFLTLKVY
DLCLAYLGPAMAQVRVSDIQEVELDLIDKVEIGKTVLVVVRVLGSSKHPFRNKYFRNMDV
RLQLASAIVTLRLTEDQDEYSENYMLRAVTVGQTTLVAIATDRMGRKFTSAPRHIEVFPP
FRLVPEKMTLIITNMMQIMSEGGPQPQSTIHFSISNQTVAAVNRRGQVTAKVVGTAVVHG
TIQTVNEDTGKVIVFSQDEVQIEVVQLQAVRILAAATRLVTATEMPVYVMGVTSTQTPFS
FSNASPMLTFHWSMSKRDVLDLVPRHSEVFLQLPAENNFAMVVHTKAAGRTTIKVTVRSK
NSSFGQFERNVLELSDEIQILVFEKLQLFYADCQREQILMPMNSQLKLHTNREGAASVSS
RVLKCFPNSSVIEEDGEGLLRSGSIAGTAVLEVTSIEPFGVNQTTVTGVQVAPVTYLRLS
SYPKLYTAQGRTLSAFPLGMSLTFIVEFYNNIGEKFHTHNTRLYMALNRDDLLLIGPGNK
NYTYMAQAVNKGVTVVGLWDQRHPGMADYIPVAVEHAIEPDTKLISVGDVICFSTQLVSQ
HGEPGVWMISTNNIIQTDTVTGVGVARSPGTATIFHDIPGVVKTFREVVVNASSRLTLSY
DLKTYLTNTPNATVFKLFISTGRSVNLKGSCTPSQALAVEKVLLPETLMLCHVQFSNTLL
DIPASKVFHIYSEFSVEKGVYVCLIKVRQESEELRQVLSVADTSVYGWATLLSERGKNGM
QRILIPFIPGFYMNQSEFVLGHKDTGELRILGVERVLESLEVFHSSPFLTVSGHKHSTLT
TSVTLYLIRIVNFTAFQQMSSPAFINVSCALTNQHEAVVVRAKDVSGADHCEESGVFKNF
VGSYQILLFTLFAVLASTAFIFLAYNAFLNKVQTIPVVYVPTIGPTQPGSYTATCSPPHF
LSSQPPLVQSRLQHWLWSIKH
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgattgcctttggggctcctcgacccagaggcttcagacttcttttctccttgactcca
caccacttcttcctgtttttaattgggaccctggccaacaaacttaatgtacctcaagtg
ttactacccttcagccgggagccaggccgcgtacccttcttgctggaggctcagcggggc
tgctacatctggcattccactcagcatgatgcagttgccatacagcctttatacgaaaat
ggcacctcttgctcccaaagggcagttcttgttgctgaatccacccaaccgatacgactc
agcagtattattctcgctcgagaagtggtgacagaccatgagctacgctgtgatgttaag
gtcgatgtgatagacaacattgagattgtttctcgaacccgggagctgtacgtggacgat
gcaccactggaacttatggtgagggccctggattctaaaggaaacacattcagcactctg
gcgggcatggtgtttgagtggagtattgctcaggacaaggagtcatcaagagaggagctg
tctagcaaaattagaattctgaactactctgaggctgagtattctccccctgactatata
actgagatggaaaaggaagagaaacaaggggacgtgatcttggtgtctgggatgagaact
ggagctgctgttgtaaaagtgcgaattcacgagccgttctacaagaaagtggctgcagcc
ttgatccgcctgcttgttctggagaacatatttcttataccatcccatgatacatatctc
ttagtaggagcctatatgaaatacagagtggcaaaaatggttcagggaagaatgacagag
ggaaaatttcccctggaacattacacgctggagctgcaagaccacagacttatagatgtt
gggcttcgttctggaacagtggctctattggatgagaaaacagccatggtgacagctctc
caactgggccaaactaacctcgtctttgtgcacaaaaatgttcatatgcgctctgtgtct
ggactcccaaactctaccatatatgttgtagagccaggatttttaggtttcacaatccat
cccggaggccggtggagtctagaggtggggcaggtgtacatcatcacagtggaagtgttt
gacaagagcagcacaagggtctacatttctgataatctcaagatcacgttccagttttct
aaggagtactttgaagagcagctgagtactttaaatggatcttaccacatggtaaaggcc
ctgaaagatggagctgtggtgataaatgcaagcctgacctccagcctttgggagagcaac
agttcccagcctaaaacctatcaaatcaatcaccaacaagaagtgaagatttactttccc
attcaacttaaacccagctttctggcatttccccattatcctctgggaatatcgaatcga
ttcacagttcaggtagagggtggtagtggcaacttcacctggagttcttctaacgaaaca
gtggccatggttaccaccaaaggtgtggtaaccgcaggtcaggtgagaggaaacagcacc
attttggcaagagatgtacaaaatccttttcgatctggaaatattaaggtgtatgtcatg
aagctgaacaaaatggaactgttaccatttcaagctgatgtggaaataggccagattatt
gaggtgcccattgcaatgtatcatgtaaatacagagaccaaggaggccatcgcattcaca
gactgctcgcacttacccctcgatctcaactcggacaagcaaggagtcttcactcttttt
aaagaaggtattcaaaagccaggaccgatgcactgttctagtgtccacatagcagccacg
tctccgggccatactctggtgaccatcagtgtgactggacatgaagagcacgtgtggagc
agtgccacatttgctgcttacgagcctctaaaggctctaaaccctgtggaagtggctttg
gtgacatggcactccgtgaaggaaatggtatttgaagggggccctcatccctggatcttg
gagccatcccgattttttttggagctgagcatggagaaggcagaggccattagaataaca
gaagtccggctgccagctaagaggaagcagaaccagtatgtctaccgcgtcctgtgccta
gagttaggggaacaagttctcactttacggattgggaatcacccgggagtcctaaaccct
agtccctctgtggaaaaggtgcaggtgcgcttcatctgtgcccatcctgccagtatgttg
gtgacaccgatgtacaaggtgccagctggcacccagccatgtcctctgccacagtacaac
aagcaactgattcctgtgtccagtgtgagggacacggtcctggaactggcagtatttgat
cagcacgggaggaagtttgataatttcagctcattgatgctagaatggaaatcttccaac
gagacgctagcccgttttgaaagtcctaagtcagtggagatggtagccagagacgatggc
agtgggcagacccggctgcacggccatcagatccttgaggtgcatcagataaaggggact
gtgctcattggagtcaattttgctggttattcagggaagagaagcccaaaagggatttcc
aactcgccaaggtccgcgggggtagaactactcttggtggaagatgtcacagtccagcct
gagaacgccaccatctacaaccatcctgatgtgaaggaagtatttaaccttgtggaagga
tctggctactttctggtcaacagcagtgagcaagacatcgtcaccaccacttacatggaa
tcagaaggctcggtccagttagttccagcacatcctggatttctaaccctgaaagtgtat
gacctgtgcctggcctacttgggtccagcaatggcccaggtcagggtgtcagacatacag
gaggtagagctggatctgatcgataaggtggagatcggtaaaaccgtgttagtggttgtg
agggttcttggctcttctaaacaccctttccggaacaagtacttcagaaacatggatgtc
aggctgcagctggcatctgccattgtcaccctgcgattaacggaagaccaggatgaatac
tctgaaaactacatgctccgtgctgtcactgttggacaaaccacacttgtggccattgcc
acagatagaatggggaggaaattcacatcagcgcctcggcacatcgaggtctttcctcca
tttagactcgttcctgagaaaatgaccctgattatcactaacatgatgcagataatgtct
gaaggtggccctcagccccagtccaccattcacttctctatcagcaatcagactgtagct
gctgttaacaggagagggcaagttacagccaaagtggtgggcacggctgttgtacacggc
accatccagacagtgaatgaagacactggcaaagtcattgtgttttcccaggatgaagtc
caaattgaagttgtccagctccaggctgttaggatccttgcggctgcgacccgactcgtc
acagccacggagatgccagtttacgtcatgggagtgactagtacccagactcctttctcc
ttcagcaatgccagccccatgctcacattccactggtccatgagcaaaagagatgtgctg
gacctggtacccaggcattcagaggtatttctacaacttccggctgagaacaactttgcc
atggttgttcacacaaaagccgctggcaggaccacgatcaaggtcacggtccgcagtaag
aacagctccttcggtcagtttgagaggaatgtgctcgagctgtccgatgagatccagatc
ctggtatttgaaaaactccaacttttctatgcagactgccaacgtgagcagattctgatg
cctatgaattctcagctcaagctacacaccaacagagaaggcgcagcctctgtgagttcc
cgtgttctcaagtgtttccctaactcctccgtcattgaagaagatggtgaaggactcctg
agatctggatccattgcgggtactgcagtattggaagtcacttctatagaaccttttgga
gtcaatcaaacaactgtaactggagtccaggtagcaccagtgacttaccttcggttgagc
agctaccccaagctatacacagcacaaggaaggaccctgtcagcctttcctctgggcatg
tctctcacctttattgttgagttttataataacattggagaaaaattccacacccacaat
actcggctttatatggctctgaacagagacgacttgctgcttattggaccaggaaacaaa
aactatacatatatggcccaggctgtgaataaaggggtgacagttgtgggtctgtgggac
caaagacaccccggcatggcagattacatccctgtggctgtagagcatgccattgagcca
gacaccaagcttatctctgttggcgatgtcatctgcttcagcactcagctcgtcagtcag
cacggtgagcctggggtgtggatgatttccaccaacaacatcatacagacagacactgtc
actggagtaggagtggctcggagcccaggaactgcaacaatttttcatgacatccctgga
gttgtgaaaacgttccgagaggtagtagtcaatgcatcatcaagattgacactcagctat
gacctgaaaacttacctcaccaatacccccaatgcaactgtattcaaactcttcatcagc
acaggcagaagtgtcaacctcaaaggatcctgtaccccaagtcaggctttggctgttgaa
aaagttcttcttcctgagaccctcatgctatgccatgtgcagttcagcaatactttacta
gacattccagcaagtaaagtctttcacatttactcagaattcagcgtggagaaaggggtc
tatgtctgcctaatcaaggttcgacaggagtcagaggagctgcgccaggtcctgagtgtg
gcggacacctcggtctatgggtgggcaactctgctcagtgaacgtggcaagaatggcatg
caaagaatcctcattcctttcatccctggcttttacatgaaccagtccgagtttgttctt
ggccacaaagacaccggggagctaagaatcctgggagtggagagagttcttgagagccta
gaggtcttccacagctccccatttctaacagtctccggccataagcattctaccctcaca
acaagcgtaactctctacctgatacgcatagtcaacttcactgccttccagcagatgtca
tcacctgctttcattaatgtttcctgtgcactgaccaatcaacatgaggctgtggtagtc
agagcaaaagatgtatctggtgcagatcactgtgaagagtcaggtgtcttcaagaatttc
gttggttcttaccagatcctgctgtttacactctttgctgtgttggcatccactgctttc
atcttcctagcatacaatgccttcctgaacaaggtacagactattccagttgtttatgtg
ccaacaataggaccgactcagccaggttcctatacagccacctgttctccccctcacttc
ctgagctcacagccaccactagtgcagagtcggctacaacactggctgtggagtataaaa
cactaa
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integrated database retrieval system
