Rattus norvegicus (rat): 54266
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Entry
54266 CDS
T01003
Symbol
Madcam1
Name
(RefSeq) mucosal addressin cell adhesion molecule 1 precursor
KO
K06779
mucosal vascular addressin cell adhesion molecule 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04514
Cell adhesion molecule (CAM) interaction
rno04518
Integrin signaling
rno04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
54266 (Madcam1)
04518 Integrin signaling
54266 (Madcam1)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
54266 (Madcam1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
54266 (Madcam1)
Cell adhesion molecules [BR:
rno04515
]
Immunoglobulin superfamily
Other
54266 (Madcam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adhes-Ig_like
ICAM_N
Motif
Other DBs
NCBI-GeneID:
54266
NCBI-ProteinID:
NP_062190
RGD:
3029
Ensembl:
ENSRNOG00000008217
UniProt:
O70540
A6K8Z4
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All DBs
Position
7:complement(10686920..10690322)
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AA seq
394 aa
AA seq
DB search
MEPILALLLALGPFQLSRGQSFQVNPPEPEVAVAMGTSLQINCSMSCDKDIARVHWHGLD
TNLGNVQTLPGSRVLSVRGMLSDTGTRVCVGSCGSRSFQHSVKILVYAFPDQLEVTPEFL
VPGRDQVVSCTAHNIWPAGPDSLSFALLRGEQSLEGAQALETEQEEEMQETEGTPLFQVT
QRWLLPSLGTPALPALYCQVTMQLPKLVLTHRRKIPVLQSQTSPEPPSTTSAKPYILTSS
HTTKAVSTGLSSVALPSTPLSSEGPCYPEIHQNPEADWELLCEASCGSGVTVHWTLAPGD
LAAYHKREAGAQAWLSVLPLGPIPEGWFQCRMDPGGQVTSLYVTGQVIPNPSSMVALWIG
SLVLGLLALAFLAYCLWKRYRPGPLPDSSSCTLL
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggagcccatcctggccctcctgctggccctgggacccttccagctcagcagaggccag
tccttccaggtgaatcctcctgagcctgaggtagctgtagccatgggcacatccctccag
atcaactgcagcatgtcctgtgacaaggatatagcccgggtgcactggcatggcctggac
accaacctgggcaatgtgcagaccctcccaggcagcagggtcctctccgtacgaggcatg
ctgtcagacacgggcactcgtgtatgcgtgggttcctgtgggagtcgaagctttcagcac
tctgtgaagatccttgtgtatgcctttccagaccagctggaggtaaccccggagttcctt
gtacctggacgggaccaggtagtgtcctgcacagcccacaacatctggcctgcaggcccg
gacagtctttcctttgccttgctccgaggagagcagagcctggagggtgctcaggccctg
gaaacagagcaagaggaggagatgcaagagactgagggcactccactcttccaagtgaca
caacgctggttgctgccctccctggggacccccgcccttcccgccctttattgccaggtc
accatgcagctgcccaaactggtgctgacacatagaaggaagattccagtcctacagagc
cagacctcaccagagccccccagcaccacctctgctaagccatacatcctgacctcatca
catactactaaggcagtctccactgggctcagcagtgtagccctgccttctacgcctctg
agctccgaggggccctgctaccccgaaatccaccagaacccagaggcagactgggaactt
ctctgcgaagcctcctgtgggtctggagtgacggtgcattggaccctggctcctggtgac
ctggcagcctaccacaagagagaagctggggcccaggcatggctaagcgtgctgcccctg
ggccccattcctgagggctggttccagtgtcgcatggaccctggcgggcaggtgaccagt
ctgtatgttactggccaggtgatcccaaacccctcctccatggtcgccctgtggattggc
agcttggtgctggggctgcttgcactcgccttccttgcctactgcctgtggaaacgctac
cggccgggtcctctcccagactccagctcgtgtacgctcctatga
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