Rattus norvegicus (rat): 59107
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Entry
59107 CDS
T01003
Symbol
Ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 precursor
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
59107 (Ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
rno04990
]
59107 (Ltbp1)
Domain-containing proteins not elsewhere classified [BR:
rno04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
59107 (Ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
hEGF
EGF_3
FXa_inhibition
Plasmod_Pvs28
EGF_MSP1_1
EGF_TEN
Motif
Other DBs
NCBI-GeneID:
59107
NCBI-ProteinID:
NP_067598
RGD:
68379
Ensembl:
ENSRNOG00000033090
UniProt:
Q00918
D3ZAA3
A6H9X2
LinkDB
All DBs
Position
6:complement(25781625..26177346)
Genome browser
AA seq
1712 aa
AA seq
DB search
MAGAWLRWGLLLWAGLLAWSAHGRVRRITYVVRPGPGLPAGTLPLAGPPRTFNVALDARY
SRSSTATSSRSLAGPPAERTRRTSQPGGAALPGLRSPLPPEPARPGAPSRQLHSKAGAQT
AVTRFAKHGRQVVRSKVQQDTQSSGGSRLQVQQKQQLQGINVCGGQCCHGWSKAPGSQRC
TKPSCVPPCQNGGMCLRPQFCVCKPGTKGKACEITAAQDTMSPVFGGQNPGSSWVPPEPA
AKRTSTKKADTLPRVSPVAQMTLTLKPKPSMGLSQQIHSQVAPLSSQNVMIRHGQTQEYV
LKPKYFPAPKVVSGEQSTEGSFSLRYGQEQGTAPFQVSNHTGRIKVVFTPSICKVTCTKG
NCHNSCQKGNTTTLISENGHAADTLTATNFRVVICHLPCMNGGQCSSRDKCQCPPNFTGK
LCQIPVLGASMPKLYQHAQQPGKALGSHVIHSTHTLPLTMTNQQGVKVKFPPNIVNIHVK
HPPEASVQIHQVSRIDGPVGQRVKEVQPGQSQVSYQGLPVQKTQTVHSTYSHQQVIPHVY
PVAAKTQLGRCFQETIGSQCGKALPGLSKQEDCCGTVGTSWGFNKCQKCPKKQSYHGYTQ
MMECLQGYKRVNNTFCQDINECQLQGVCPNGECLNTMGSYRCSCKMGFGPDPTFSSCVPD
PPMISEEKGPCYRLVSPGRQCMHPLSVHLTKQICCCSVGKAWGPQCEKCPLPGTAAFKEI
CPGGMGYTVSGIHRRRPIHQHIGKEAVFVKPKNTQPVAKSTHPPPLPAKEEPVEALTSSR
EHGPGVAEPEVVTAPPEKEIPSLDQEKTRLEPGQPQLSPGVSTIHLHPQFPVVVEKTSPP
VPVEVAPEGSTSSASQVIAPTQVTEINECTVNPDICGAGHCINLPVRYTCICYEGYKFSE
QQRKCIDIDECAQAQHLCSQGRCENTEGSFLCICPAGFMASEEGSNCIDVDECLRPDVCR
DGRCINTAGAFRCEYCDSGYRMSRRGHCEDIDECLTPSTCPEEQCVNSPGSYQCVPCTEG
FRGWNGQCLDVDECLQPKVCTNGSCTNLEGSYMCSCHKGYSPTPDHRHCQDIDECQQGNL
CMNGQCKNTDGSFRCTCGQGYQLSAAKDQCEDIDECEHRHLCSHGQCRNTEGSFQCLCNQ
GYRASVLGDHCEDINECLEDSSVCQGGDCINTAGSYDCTCPDGLQLNDNKGCQDINECAQ
PGLCGPHGECLNTQGSFHCVCEQGFSISADGRTCEDIDECVNNTVCDSHGFCDNTAGSFR
CLCYQGFQAPQDGQGCVDVNECELLSGVCGEAFCENVEGSFLCVCADENQEYSPMTGQCR
SRATEDSGVDRQPKEEKKECYYNLNDASLCDNVLAPNVTKQECCCTSGAGWGDNCEIFPC
PVQGTAEFSEMCPRGKGFVPAGESSYETGGENYKDADECLLFGEEICKNGYCLNTQPGYE
CYCKEGTYYDPVKLQCFDMDECQDPNSCIDGQCVNTEGSYNCFCTHPMVLDASEKRCVQP
TESNEQIEETDVYQDLCWEHLSEEYVCSRPLVGKQTTYTECCCLYGEAWGMQCALCPMKD
SDDYAQLCNIPVTGRRRPYGRDALVDFSEQYGPETDPYFIQDRFLNSFEELQAEECGILN
GCENGRCVRVQEGYTCDCFDGYHLDMAKMTCVDVNECSELNNRMSLCKNAKCINTEGSYK
CVCLPGYVPSDKPNYCTPLNTALNLDKDSDLE
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagcctggctcaggtggggactcctgctctgggcagggctgctagcgtggtct
gcgcacggccgggtgcggaggatcacgtacgtggtgcgcccgggcccgggactgccggcc
ggaaccctgcctctggctgggcccccgcggaccttcaacgtcgcactggacgccaggtac
agccggagctcaacagccacctccagccgctccttggccgggcccccagccgagcggacc
cggcgcaccagccagcctggcggcgcggccctgcccgggctccgatctccgctgccaccc
gagcccgcgcgtccgggggcgcccagccggcagctccactcaaaggccggtgctcagacc
gcggtcactcgcttcgccaaacatggcaggcaagtcgtgcgctccaaagtgcagcaggac
acgcagagctccgggggctccagactgcaggttcagcagaagcagcagctgcaggggatc
aatgtctgtggagggcagtgctgccatgggtggagtaaggccccgggctcccagaggtgc
accaaaccaagctgtgttccaccatgccagaatggagggatgtgtctccggcctcagttc
tgtgtgtgtaagccagggacaaagggcaaagcctgcgagatcacagctgcccaggacacc
atgtcaccagtgtttggagggcagaaccctggctcctcgtgggtccctcctgagccagca
gcaaagcgtacttcaaccaagaaggcagacaccttaccaagggtcagtccagtggcccag
atgaccttgaccctcaagccgaagccgtccatgggactctcccagcagatacattctcaa
gtggcacccttgtcttcccagaatgtgatgattcggcatggccagacccaggagtatgtg
ctcaagcccaagtacttcccagccccaaaggtggtctctggagagcagtccacagaaggc
tctttctctttaagatatgggcaggagcaaggcacagcaccctttcaggtgagtaaccac
actggtcgcatcaaggtggtctttactccgagcatctgtaaagtgacctgcaccaagggc
aactgtcacaacagctgccagaaggggaataccaccactctcattagtgagaacggccat
gcagccgacaccctgacagccacgaacttccgagtggtaatttgccatcttccatgtatg
aatggtggccagtgcagttcaagggacaaatgtcagtgccctccaaatttcacaggaaag
ctttgccagatccctgtccttggtgccagtatgcctaaactctaccagcacgcccagcag
ccaggcaaggcactggggagtcacgtcatccattccacacataccttgcctctaaccatg
accaaccagcaaggggtcaaagtgaaatttccccccaacatagtcaatatccatgtgaag
catcctcctgaggcttctgtgcagatacaccaggtttccagaattgatggcccagtgggc
cagagggtgaaagaagtgcaaccgggccagtcccaagtctcttaccaagggctgcccgtc
cagaagacccagacagtccattccacatactcccaccagcaggtcattccgcatgtgtat
cccgtggctgctaagacacaacttggacgatgcttccaggaaaccattgggtcacagtgt
ggcaaagcgctccctggcctttcaaagcaagaggactgctgtgggacagtggggacctcc
tggggctttaacaaatgccagaaatgccccaagaagcaatcctatcatggatatactcaa
atgatggaatgcctacaaggatataaacgggttaacaacaccttttgtcaagatattaat
gaatgtcagctccaaggcgtatgccctaatggggagtgtttgaataccatgggcagctac
agatgctcctgcaaaatgggatttgggcctgaccctaccttttcaagttgtgtgccggat
ccccctatgatctcagaagagaaagggccctgctaccgcctcgtcagtcctgggaggcag
tgtatgcaccctctctctgttcacctcaccaagcagatctgctgttgtagtgtgggcaag
gcctggggcccacagtgtgagaaatgtcccctcccgggcacagctgcttttaaggaaatc
tgtcctggtggaatgggttatacggtttctggcattcatagacgcaggccaatccatcag
catataggtaaagaagctgtatttgtcaagccaaagaacactcaacctgttgctaaaagt
actcatcctccacctctcccagccaaggaagagcctgtggaggccctgacctcctcgcgg
gaacatgggccgggagtggcagagcctgaagtggtaacagcacctcctgagaaggaaata
ccctcactggatcaagagaaaacaagacttgaacctgggcaaccccagctctccccaggg
gtttcaactattcatctgcacccacagttcccagtagtggttgaaaagacatcccctcct
gtgcctgtggaggtggctcctgaaggttctacatcaagtgccagccaagtgattgctcct
acgcaagtaacagaaatcaacgaatgtactgtgaacccggatatttgcggagcaggacac
tgcatcaacctgccggtgaggtatacctgcatatgctacgagggctacaagttcagtgag
cagcagaggaagtgcattgacattgatgaatgtgctcaggcccagcatctctgctcccag
ggtcgctgtgagaacacagagggaagtttcctgtgtatttgcccagcagggtttatggcc
agtgaggagggttctaactgtatagatgtggatgaatgtctgaggcccgatgtgtgtagg
gacggccgctgcatcaacactgctggggccttccgatgcgaatactgtgacagtgggtac
cggatgtcacgacggggccactgtgaggatatcgatgagtgtctgaccccaagtacctgt
cccgaggaacaatgcgtgaattccccaggttcttaccagtgtgtgccctgcacagaaggg
ttccgtggctggaatggacaatgcctcgatgtggacgagtgcctgcagccaaaggtctgt
accaatggttcctgcaccaacctggaaggctcctacatgtgttcctgccacaagggctac
agccccacaccagaccatagacactgtcaagatattgatgaatgtcagcaagggaacctg
tgcatgaacgggcagtgcaaaaacactgacggctccttccggtgtacctgtgggcagggc
tatcagctgtcagcggctaaagaccaatgtgaagatattgacgaatgcgagcaccgtcac
ctctgctctcacgggcagtgcaggaacacagagggctccttccagtgtttgtgcaaccag
ggttacagagcatctgtgcttggagaccactgcgaggatatcaatgaatgcttggaggac
agtagtgtctgccagggaggtgactgcatcaatacagcagggtcctatgactgcacgtgc
ccggatggactccagctgaatgacaataagggctgtcaagacattaatgaatgtgcacag
ccaggactctgtggacctcatggggagtgtctaaacacacaaggctcattccactgtgtc
tgtgaacaagggttctccatctctgcagatggtcgtacttgtgaagatattgatgagtgt
gttaacaacactgtgtgtgacagtcacggcttctgtgacaacacagccggctctttccgc
tgcctctgttatcagggctttcaagccccacaggatgggcaagggtgtgtggatgtgaac
gaatgtgaactgctcagtggtgtatgtggggaggctttctgtgaaaatgtggaagggtcc
ttcctgtgcgtgtgtgccgatgagaaccaggagtacagccccatgactgggcagtgtcgc
tcccgggctactgaagattcaggtgtggatcgtcagcccaaagaagaaaagaaggagtgt
tattataatctcaatgatgccagtctctgtgataacgtgctggcccccaacgtcaccaaa
caagagtgctgctgtacatcgggcgccggctggggagacaattgtgagatcttcccttgc
ccagtccaggggactgctgagttctcggaaatgtgccctagaggaaaaggttttgtccct
gctggagaatcctcttacgaaaccggtggtgagaactacaaagatgctgacgaatgcctg
ctgtttggagaggaaatctgcaaaaacggttactgtttgaacactcagcctgggtatgaa
tgctactgcaaggaagggacatactacgatcctgtcaaattacagtgttttgatatggat
gaatgccaagaccctaacagttgtatcgatggccagtgtgttaatacagagggctcttac
aactgcttttgcacccacccaatggtcctggatgcctctgagaagagatgtgtgcagcca
actgaatcaaatgaacaaatagaagaaaccgatgtctatcaagatctgtgctgggagcat
ctgagtgaggagtacgtgtgtagccgtcctcttgtaggcaagcagacgacatacacagag
tgctgctgtttgtacggggaggcatggggcatgcagtgtgctctctgccccatgaaggac
tcagatgactatgcccagctgtgcaacatccctgtgacaggacggcggcgaccatatgga
cgggatgcgttggtggacttcagtgaacagtatggcccagaaacagacccttacttcatt
caggatcgctttctaaacagctttgaggagctacaggctgaggaatgtggcatcctcaac
ggctgtgaaaatggccgctgtgtaagggttcaggaaggttatacttgcgattgctttgat
ggatatcatctggatatggccaagatgacctgtgttgatgtaaatgaatgcagcgagctg
aataatcggatgtctctctgcaagaacgccaagtgcattaacacagaaggctcctacaaa
tgcgtgtgtctaccaggctacgtaccatctgacaagcccaactactgtacaccactgaac
accgctttgaatttagacaaagacagtgacctggagtga
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integrated database retrieval system
