Rattus norvegicus (rat): 641525
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Entry
641525 CDS
T01003
Symbol
Pcdhgc5
Name
(RefSeq) protocadherin gamma-C5
KO
K16497
protocadherin gamma subfamily C
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
rno04515
]
641525 (Pcdhgc5)
Cell adhesion molecules [BR:
rno04515
]
Cadherins
Protocadherins
641525 (Pcdhgc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_tail
Cadherin_C_2
PepSY
Motif
Other DBs
NCBI-GeneID:
641525
NCBI-ProteinID:
NP_001157760
RGD:
2312582
Ensembl:
ENSRNOG00000063070
UniProt:
C6JUM5
LinkDB
All DBs
Position
18:29898430..29917566
Genome browser
AA seq
944 aa
AA seq
DB search
MGPMASPQVTGKRQVLYMLSLCCCGWVSGQLRYSVVEESEPGTLVGNVAQDLGLKVADLL
SRRLRLGSEENGRYFSLSLMSGALAVNLKIDRESLCGASTSCLLPVQVVTEHPLELTRVE
VEILDLNDNSPSFATPEREMRISESAAPGARFPLDSAQDPDVGTNTVSFYTLSPSSHFSL
NVKTLKDGKLFPELVLEQQLDREAQARHQLVLTAVDGGTPARSGTSLISVIVLDINDNAP
TFQSSVLRVGLPENTPPGTLLLRLNATDPDEGTNGQLDYSFGDHTSEAVKNLFGLDPNTG
AIHVLGPVDFEESNFYEIHARARDQGQPAMEGHCVIQVDVGDANDNPPEVLLASLVNPVL
ESTPVGTVVGLFNVRDRDSGRNGEVILETTPNLPFQIKPSENHYSLLTSQPLDREVTSHY
TIDLLASDAGSPPLHTHLTIRLNISDVNDNAPHFTQQLYTAYIPENRPPGSLLCTVAASD
PDEGDNARLTYSIVGSQIQGAPASSFVYVNPEDGRVFAQRTFDYELLQMLQIVVGVRDSG
SPRLYANTSLHVFVLDQNDNAPTVLHPRSGREFSAPQRLPRSAPPGSLVTKVTAVDADAG
HNAWLSYSLLPQSTAPGLFLVSTHTGEVRTARALLEDDSDTQQVVVLVRDNGDPSLSSTA
TVLLVLEDEDAEEMPKSSDFLTHPPERSDLTLYLIVALAAVSLLSLVTFTFMSAKCLRRH
EDRDRGGGQCCRGQDSPSREFYKQSSPNLQVSSDGTLKYMEVTLRPTDSQSHCYRTCFSP
ASDGSDFTFLRPLSVQQPSALALEPEALRSRSSTLRERSQQAPPNTDWRFSQAQRPGTSG
SQNGDETGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGTGTMGLSARYGPQFTLQHV
PDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggggcctatggcatcaccacaggtcactggtaaacggcaagtgctgtatatgttgtcc
ttgtgctgctgtggctgggtgtctgggcagcttcgttattcagtggtggaggaatcagag
ccggggactttggtggggaacgttgctcaagatctgggcttaaaggtggcagatctgttg
agtcgcaggctgagactgggctctgaggagaacgggcgctatttttccctgagcttgatg
agtggagctttggcagtgaatctaaaaattgaccgagagagcctgtgtggagccagcacg
agctgcctgctgcctgtacaggtggtaaccgaacaccccctggagctcacccgggtagag
gtagagatcctagatctcaacgacaactctcctagctttgccactcctgagcgagagatg
cgcatctcagaatcagcggcacctggagccaggttcccactggacagtgcccaagaccca
gacgtgggcaccaatactgtgagcttttatactctaagccccagcagtcacttctctctg
aatgtgaagaccctaaaagatgggaagctcttcccagagctagtgctagagcagcagcta
gaccgggaagcccaggcaaggcatcagctggtactcactgctgtggatgggggaacccca
gcccgctcagggaccagccttatctctgtcattgtgctggacatcaatgataatgcccca
accttccagtcctcagttctacgtgtgggactcccagagaacacacccccggggaccctg
ctgctccgtctcaatgccactgatccagacgagggcaccaatggccaactagactactct
ttcggagaccatacatctgaagcagtgaagaatctctttggcctggatcctaacactgga
gcaatccacgtgttgggtccggtagattttgaggaatcaaatttctatgaaattcatgca
agagctcgagaccagggacagccagccatggagggccactgtgtaatccaggtggatgta
ggggatgctaacgacaatccccctgaggtgctgctggcatctttggtcaaccctgtccta
gagagcacacccgtgggcacagttgtggggttgtttaatgtgcgggaccgagactcaggt
agaaatggtgaggtgatcctggagacaactccaaacctgccatttcagatcaagccttcc
gagaaccattactcactgctcaccagccagcctttggaccgagaggtcacatcccattac
accatcgacctgctggccagtgatgctggatcacctcccctgcatacacatctcaccatc
aggctgaacatttcagatgttaatgacaacgcaccccatttcacccaacagctctacact
gcttatatcccagaaaaccggccaccaggctctctcctctgtactgtggctgcctctgat
ccagatgagggggataatgcccgcctcacctattctattgtgggaagtcaaattcaggga
gccccagcctcctccttcgtgtatgtcaaccccgaagatggacgagtctttgcccagcgg
acctttgactatgaattactgcagatgctgcagattgtggtgggggtccgagattccggc
tctccccgactgtatgctaacacatctctccatgtgtttgtccttgatcagaacgataac
gccccaactgtactgcacccacgatctggcagggagttctcagcccctcagcgtctcccc
cgatctgctcctcctggttctctggtcaccaaggtgacagctgtggatgctgatgctggt
cacaatgcatggctctcttactctctattacctcagtccacagcccctggactgttcctc
gtatctacacacactggtgaggtgcgcacagcccgggccttattggaggacgactctgat
acccaacaggtggtggtcctggtgagggacaatggtgacccttcactatcctccacagca
acagtattgctggttctggaggacgaggatgcagaggaaatgcccaaatccagcgacttc
ctcacacaccctcccgagcggtcagacctcaccctttatcttattgtggcgctggcagct
gtcagtctcttatccctagttaccttcactttcatgtcagctaagtgtctgcggaggcat
gaagatagggaccggggtgggggccagtgctgcaggggccaggactcgccctccagggag
ttctataaacagtccagtcccaaccttcaggtcagctcagatggcactctaaagtacatg
gaggtgaccctgcggcccacagattctcagagccattgctacaggacgtgcttttctcca
gcctccgatggcagtgacttcactttcctcaggcccctcagcgttcagcagccctcagcc
ttggcgctggagcccgaggccttgcgttcccggtctagtacgctgcgggagcggagccag
caagccccgcccaacactgactggcgtttctctcaagcccagagacccggcacgagcgga
tcccaaaatggggatgaaaccggcacctggcccaacaaccagttcgatacagagatgctg
caagccatgatcttggcctctgccagtgaagccgctgatgggagctccactctgggaggg
ggcactggcactatgggtttgagcgctcgatatggaccccagtttaccctgcagcacgtg
cctgactaccgccagaacgtgtacatccctggcagcaatgccacactgaccaacgcagct
ggcaaacgagatggcaaggctccggcaggcggcaatggcaacaagaagaagtcgggcaag
aaagagaagaagtaa
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