Rattus norvegicus (rat): 684173 Help Entry 684173            CDS       T01003                                  Symbol Traf5 Name (RefSeq) TNF receptor-associated factor 5   KO K09849   TNF receptor-associated factor 5 Organism rno  Rattus norvegicus (rat) Pathway rno04064   NF-kappa B signaling pathway rno04217   Necroptosis rno04621   NOD-like receptor signaling pathway rno04657   IL-17 signaling pathway rno04668   TNF signaling pathway rno05163   Human cytomegalovirus infection rno05168   Herpes simplex virus 1 infection rno05169   Epstein-Barr virus infection rno05170   Human immunodeficiency virus 1 infection rno05200   Pathways in cancer rno05203   Viral carcinogenesis rno05222   Small cell lung cancer Brite KEGG Orthology (KO) [BR:rno00001]  09130 Environmental Information Processing   09132 Signal transduction    04064 NF-kappa B signaling pathway     684173 (Traf5)    04668 TNF signaling pathway     684173 (Traf5)  09140 Cellular Processes   09143 Cell growth and death    04217 Necroptosis     684173 (Traf5)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     684173 (Traf5)    04657 IL-17 signaling pathway     684173 (Traf5)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     684173 (Traf5)    05203 Viral carcinogenesis     684173 (Traf5)   09162 Cancer: specific types    05222 Small cell lung cancer     684173 (Traf5)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     684173 (Traf5)    05168 Herpes simplex virus 1 infection     684173 (Traf5)    05163 Human cytomegalovirus infection     684173 (Traf5)    05169 Epstein-Barr virus infection     684173 (Traf5)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:rno04121]     684173 (Traf5) Ubiquitin system [BR:rno04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     684173 (Traf5) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF3_RING zf-C3HC4_2 Sina_ZnF zf-TRAF_2 zf-C3HC4 RING_XB3-XBAT31 zf-C3HC4_4 zf-RING_2 zf-RING_UBOX TRAFD1-XIAF1_ZnF zf-RING_6 TFA2_Winged_2 PDZ_3 KIF21A_2nd DUF5917 OVT1 SBD_N Spectrin_SYNE1_2 Motif Other DBs NCBI-GeneID:  684173 NCBI-ProteinID:  NP_001385630 RGD:  1593883 Ensembl:  ENSRNOG00000047957 UniProt:  A0A8I6AR28 LinkDB All DBs Position 13:complement(106100921..106149724) Genome browser AA seq 558 aa AA seqDB search MAHSEEQAVVPCAFIRQNSGNSISLDFEPDTEYQFVEQLEERYKCAFCHSVLHNPHQTGC GHRFCQHCILSLRELNSVPICPVDKEVIKPQEVFKDNCCKREVLNLHVYCKNAPGCNARI ILGRFQDHLQHCSFQAVPCPNQSCREAMLRKDVKEHLSAYCRFREEKCLYCKRDIVVTNL QDHEENSCPAYPVSCPNKCVQTIPRAGVKEHLTVCPEAEQDCPFKHYGCTVKGKRGNLQE HERAALQDHMLLVLEKNFQLEQQISDLYQSLEQKESKIQQLAGTVKKFEKELKQFTQMFG RNGSFLSNVQALTSHTDKSAWLEAQVRQLLQIVNQQQSRLDLRSLVDAVDSVKQRITQLE ASDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYSGKLIWKVTDYKAKKREA MEGHTVSVFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ RVTLMLLDQSGKKNHIVETFKADPNSSSFRRPDGEMNIASGCPRFVSHSTLESSRNTYIK DDTLFLKVAVDLTDLEDL NT seq 1677 nt NT seq  +upstreamnt  +downstreamnt atggctcattcagaggagcaagcggttgtgccctgtgccttcatccgccagaactctggc aactccatttccttggactttgagcccgacacagagtaccaatttgtggagcagctggaa gaacgctacaaatgtgccttctgccactcggtgcttcacaacccccaccagacgggctgt gggcaccgcttctgccagcactgcatcctgtctctgagagaattgaactcggtgccgatc tgccccgtagacaaggaggtgatcaagcctcaggaggtgtttaaagacaactgctgcaaa agagaagttctcaacttacacgtctactgcaaaaacgcacctggatgcaatgccaggatt attctgggacggttccaggaccaccttcagcactgctccttccaagctgtgccctgcccc aaccagagctgccgggaagccatgctccggaaagatgtgaaagagcatctgagtgcctac tgccggttccgagaggagaagtgcctttactgcaagagggacatagtggtgactaacctg caggatcatgaggaaaactcgtgtcctgcatatccagtgtcttgtcccaacaagtgtgtg cagactattccgagagctggggtgaaggaacacctcactgtgtgccctgaggctgagcaa gactgtccctttaagcactatggctgcacggtcaagggcaagcgtgggaacttgcaggag cacgagcgggcagccctgcaggaccacatgcttctggttttagagaagaacttccaacta gaacagcagatctctgacttatatcagagtctcgagcagaaagaaagcaagatccagcag cttgcaggaactgtgaagaagttcgagaaagagcttaagcagttcacacagatgttcggc agaaatggaagtttcctctcaaatgtccaggctctcaccagtcacacggacaagtcggct tggctggaagcgcaggtgcggcagctgctacaaatagttaaccagcagcaaagccggctt gatctgaggtctttggtggatgctgtggacagtgtgaaacagaggatcacccagctggag gccagtgaccagagattagttgttttagagggggagaccaataagcacgacgcacacatt aatatccacaaagcacagctgaataagaacgaagaacggtttaagctgctggagggcgcc tgctacagtggcaagctcatttggaaggtgacagattacaaggcgaagaagagggaggct atggaggggcacacagtgtccgtcttcagccagcctttctataccagccgctgtggctac cggctctgtgccagagcgtacctgaacggggatgggtcggggaagggaacgcacctgtct ttgtactttgtggtgatgcggggtgagttcgactcactattacagtggccattcaggcag agggtgacactaatgcttttggatcagagtggcaagaagaaccacattgtggagaccttc aaagctgaccccaatagcagcagcttcagaagaccggacggggagatgaacattgcctct ggctgtccccgctttgtttctcattctactctggagagttccaggaacacctacattaaa gacgacaccctattcttgaaagtggccgtggatttaactgacttggaggatctgtaa

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