Rattus norvegicus (rat): 78963
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Entry
78963 CDS
T01003
Symbol
Apaf1
Name
(RefSeq) apoptotic protease-activating factor 1
KO
K02084
apoptotic protease-activating factor
Organism
rno
Rattus norvegicus (rat)
Pathway
rno01524
Platinum drug resistance
rno04115
p53 signaling pathway
rno04210
Apoptosis
rno04215
Apoptosis - multiple species
rno05010
Alzheimer disease
rno05012
Parkinson disease
rno05014
Amyotrophic lateral sclerosis
rno05016
Huntington disease
rno05020
Prion disease
rno05022
Pathways of neurodegeneration - multiple diseases
rno05134
Legionellosis
rno05152
Tuberculosis
rno05160
Hepatitis C
rno05161
Hepatitis B
rno05162
Measles
rno05164
Influenza A
rno05168
Herpes simplex virus 1 infection
rno05169
Epstein-Barr virus infection
rno05200
Pathways in cancer
rno05222
Small cell lung cancer
rno05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
78963 (Apaf1)
04215 Apoptosis - multiple species
78963 (Apaf1)
04115 p53 signaling pathway
78963 (Apaf1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
78963 (Apaf1)
09162 Cancer: specific types
05222 Small cell lung cancer
78963 (Apaf1)
09172 Infectious disease: viral
05161 Hepatitis B
78963 (Apaf1)
05160 Hepatitis C
78963 (Apaf1)
05164 Influenza A
78963 (Apaf1)
05162 Measles
78963 (Apaf1)
05168 Herpes simplex virus 1 infection
78963 (Apaf1)
05169 Epstein-Barr virus infection
78963 (Apaf1)
09171 Infectious disease: bacterial
05134 Legionellosis
78963 (Apaf1)
05152 Tuberculosis
78963 (Apaf1)
09164 Neurodegenerative disease
05010 Alzheimer disease
78963 (Apaf1)
05012 Parkinson disease
78963 (Apaf1)
05014 Amyotrophic lateral sclerosis
78963 (Apaf1)
05016 Huntington disease
78963 (Apaf1)
05020 Prion disease
78963 (Apaf1)
05022 Pathways of neurodegeneration - multiple diseases
78963 (Apaf1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
78963 (Apaf1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
78963 (Apaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
APAF1_C
NB-ARC
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
APAF-1-like_WHD
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_RIG_2nd
NBCH_WD40
CARD
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
WD40_like
Beta-prop_NUP159_NUP214
Beta-prop_HPS5
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
PEP5_VPS11_N
Beta-prop_WDR75_2nd
Beta-prop_NWD2_C
Ge1_WD40
Beta-prop_SPT8
Beta-prop_WDR11_2nd
Beta-prop_DCAF12
Utp8_b_propeller
CARD_2
Beta-prop_Nup120_160
KNTC1_N
AAA_16
Beta-prop_IP5PC_F
Beta-prop_IFT122_2nd
NPHP3_N
AAA_22
NACHT
ATPase_2
Motif
Other DBs
NCBI-GeneID:
78963
NCBI-ProteinID:
NP_076469
RGD:
620575
Ensembl:
ENSRNOG00000008022
UniProt:
Q9EPV5
A6IFU7
LinkDB
All DBs
Position
7:complement(27381392..27466772)
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHKEALEKDIKTSYIMDHMISNGVLTVVEEEKVKSQATQYQRAAALIKMI
LNKDNYAYISFYNALLHEGYKDLAGLLHSGLPLVSSSSGKDTDGGNTSFVRTVLCEGGVP
QRPVIFVTRKKLVSAIQQKLWKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHALLEGCFSG
GVHWVSIGKQDKSGLLMKLQNLCTRLGQEESFSQRLPLNIEEAKDRLRVLMLRKHPRSLL
ILDDVWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVIPVESGLGKEKGLEILSLFVN
MKKEDLPVEAHSIIKECKGSPLVVSLVGALLRDFPNRWAYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCVLWDLETEEVEDILQEFVN
KSLLFCNRNGKSFCYYLHDLQVDFLTEKNRSQLQDLHRKMVTQFQRYHQPHTLSPGQEDC
MYWYNFLAYHMASAGMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCAV
CENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDTGRLYLEWINK
KTIKNLSRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEV
LCCAFSSDDSYIATCSVDKKVKIWDSGTGKLVHTYEEHSEQVNCCHFTNKSNHLLLATGS
NDSFLKLWDLNQKECRNTMFGHTNSVTHCRFSPDDELLASCSADGTLKLWDVRSANEKKS
INVKRFFLSSEDPPEDVEVIVKCCSWSADGDRIIVAAKNKVLLLDIHTSGLLTEIHTGHH
STIQYCDFSPYDHLAVIALSQYCVELWNIDSRVKVADCRGHLSWVHGVMFSPDGSSFLTA
SDDQTIRVWETRKVCKNSAIVLKQEIDVVFQENEMMVLAVDNIRGLQLIAGKTGQIDYLP
EAQVSCCCLSPHLEYVAFGDEEGAIKIIELPNNRVFSSGIGHKKAVRHIQFTADGKTLIS
SSEDSVIQVWNWQTEEYVFLQAHQETVKDFRLLRDSRLLSWSFDGTVKVWNVITGRIERD
FTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFELPSPLHELKGHNSCVRCSAFSLDGI
LLATGDDNGEIRIWNVSDGQLLHLCAPISIEEGTATHGGWVTDVCFSPDRKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQVLE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggcccgaaattgtttgcttcaacataaagaagctctggaaaaggacatc
aaaacatcctacatcatggatcacatgatcagtaatggcgtcttaacagtagtagaggag
gaaaaggtcaaaagtcaggccactcaatatcaacgagcagctgctttaattaaaatgata
cttaataaagacaattatgcctacatttcattctacaacgctctactacacgagggctat
aaagaccttgctggacttctgcatagcggccttcctcttgtgtcttcttccagcggcaag
gacacagacggtggaaacacttcatttgtaaggacagtgctgtgtgaaggtggagtgcca
cagaggccagtcatctttgtcactaggaagaagctggtcagtgcgattcagcagaagctc
tggaaactgaatggggagccagggtgggtcaccatctatggaatggcaggctgtggcaag
tctgtattagctgcggaagctgttcgcgaccatgccctcctagaaggttgtttttcaggg
ggcgtacactgggtttccatcggaaaacaagacaagtccgggcttctaatgaagctgcag
aatctttgcacgcggttgggtcaagaagagagtttctctcagaggctcccgcttaacatt
gaggaggccaaagaccgtctccgtgttctgatgctgcgaaaacacccaaggtctctgttg
atcttggatgacgtttgggatccttgggtgttaaaggcttttgacaaccagtgtcagatt
cttcttaccaccagagataagagtgttaccgattcagtaatgggtcctaagtatgttatc
cctgtggagagtggtctagggaaagagaagggacttgaaatcttgtcactttttgttaat
atgaagaaagaagatctgccagtggaggctcacagtattataaaggagtgcaaaggctct
cctctcgtcgtgtctttagttggtgcgcttttacgggattttcccaatcgctgggcatac
tacctcaggcagcttcagaataagcagtttaagagaataaggaaatcttcatcttatgac
tacgaggctctggatgaagccatgtccataagtgtggagatgctcagagaagacatcaag
gactactacacagacctctccatccttcagaaggatgtcaaggtgcctacgaaggtgctg
tgtgttctctgggacttggaaacggaagaagttgaagacatcttgcaggagttcgttaat
aagtctctcttattctgtaatcggaatgggaagtcattttgttattatttacacgatctt
caagtagatttccttacagagaagaatcgaagtcagctccaggatctgcacaggaagatg
gtcactcaatttcagaggtatcaccagccgcatacgctgtctccaggtcaggaggactgc
atgtactggtacaacttcctggcctatcatatggccagtgccggtatgcacaaagaactt
tgtgctttaatgttttccctggattggattaaagcaaaaacagaacttgtcggccctgcg
catctgattcatgagttcgtggaatataggcatatactggatgaaaaggattgtgcagtc
tgtgagaattttcaggagtttttatctttaaacggacaccttcttggacgacagccattt
cctaacattgtgcaactgggcctctgtgaaccagagacttccgaagtttatcaacaagca
aagctgcaggccaagcaggaggtggataccgggcggctttacctggaatggatcaacaaa
aaaaccatcaagaatctgtcccgcttagtcgttcgcccccatacagacgccgtgtaccat
gcgtgtttttctcaggatggtcagagaatagcttcttgtggagctgataaaaccttgcag
gtgtttaaagccgagacaggagagaaacttcttgacattaaagctcatgaagatgaggtg
ctttgctgtgcgttctcctcagatgacagttacatagcaacctgctcagtggataagaaa
gttaagatttgggattctgggactgggaagctagtgcacacctacgaagaacactcagag
caggtcaattgctgccatttcaccaataagagcaaccaccttcttttggccaccgggtca
aatgactccttccttaagctctgggatttgaatcaaaaagaatgccgaaataccatgttc
ggtcacacgaactcagtcacccactgcaggttctcaccagacgatgagctcttggcgagt
tgctcagccgacgggactttaaagctttgggatgtgagatcagcaaacgagaagaaaagc
attaatgtgaagcgcttcttcctgagttcagaagacccaccagaggacgtggaggtgatc
gtgaaatgttgctcctggtctgcagatggcgacagaataatagtggcagcaaaaaacaaa
gtcctccttcttgatattcatactagtggcctgctgactgagatccacacaggtcatcac
agcaccatccagtactgtgacttctccccctacgaccatttggcagtgattgccctgtct
cagtactgtgtggagttgtggaacatagactcccgggtaaaggtggctgactgcagggga
catttaagttgggtccacggtgtgatgttttctcctgatggctcctcgttcttgacagct
tctgatgaccaaacaataagggtctgggagacaagaaaggtgtgcaagaactctgccatt
gtgttaaagcaggaaatagatgtcgtgtttcaagaaaacgaaatgatggtccttgcagtt
gacaacataagaggcctacaactcattgctggaaaaacaggccagattgattacctgcct
gaagcccaagtgagttgctgctgcctaagtccacatcttgagtacgttgcatttggagat
gaagagggagccattaagattatagaacttccaaacaacagagttttcagctctgggatt
gggcacaagaaagctgtacggcacatccagttcacagctgatgggaagacactgatttca
agttctgaagactctgtgattcaggtgtggaattggcagacagaggagtatgtatttctg
caagcccatcaggaaacagtaaaggacttcagactcctgagagattcacgattgctttcc
tggtcattcgatggaacggtgaaggtgtggaatgtcattaccggaagaattgaaagagac
tttacttgtcatcagggcacagtgctttcctgtgctatctcttctgatgccaccaagttt
tcatctacctcagctgataagaccgccaagatctggagttttgaactcccttcccctctt
catgagctgaagggccataacagctgtgtccgctgctctgccttctcgctggatggcatc
ctgttagcaactggagatgacaatggagaaatcaggatatggaatgtctcagatggccag
cttcttcatttgtgtgctccgatttccatagaagaaggaacggctacccacggaggctgg
gtgactgatgtttgcttctctcctgacagaaaaatgcttgtctctgccggaggatacctt
aagtggtggaatgttgttactggggagtcctcacagaccttctacaccaatggaacaaac
ctcaagaaaatacatgtgtcccctgacttcagaacatatgtgaccgttgataatcttggt
attttatatattttacaggttttagagtaa
DBGET
integrated database retrieval system
