Rattus norvegicus (rat): 81859
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Entry
81859 CDS
T01003
Name
(RefSeq) sharpin
KO
K20894
shank-associated RH domain-interacting protein
Organism
rno
Rattus norvegicus (rat)
Pathway
rno04217
Necroptosis
rno04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
81859
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
81859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rno04121
]
81859
Ubiquitin system [BR:
rno04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
81859
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GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
81859
NCBI-ProteinID:
NP_112415
RGD:
631353
Ensembl:
ENSRNOG00000012812
UniProt:
Q9EQL9
A6HS86
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All DBs
Position
7:complement(109951336..109955552)
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AA seq
381 aa
AA seq
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MSPPAGGAAAAADPASPVVLLAVQAAVRLLGAGHEDEAQLRKLQLKADPERPGRFRLGLL
GIEPGAVSLEWPLESICYTIRGPNQHELQPPPGGPGTFSVHFLNSEEAQQWAALVRDATA
EGQNGNDSTAPVPTPAMCPTSPPCSSVTPTPKATQPEMDLPQGSGNLKKEELATHLAQAI
AGGDEKAAAQVAAILAQHHVALNVQLLEAWFPRGPIRLQVTVEDATSVLSSSSSAHVSLQ
IHPHCSIAALQEQVFSEFGFPPAVQRWVIGRCLCMPERSLASYGVSQDGDPAFLYLLSAP
REVSGHSPQHSKMDRKLGCLFPQSLELPHNLQASSSSLPSPPQPGWSCPSCTFINASNRP
GCEMCSTQRPCAWDPLTATST
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgcccgccggcggtgcggcagcggctgcagaccctgcttcacctgtggtgctc
ctggcagtgcaagccgcggtgagactcctgggcgccggacatgaagacgaagcgcagctg
cgaaagctgcagttgaaagccgaccctgagcggcctggacgcttccggctgggactgtta
ggcattgagccaggggcggtcagtttagaatggcccttggagtctatttgctataccatt
cgtggtcctaaccaacacgagctgcagcctccacctggaggtcctggaaccttcagtgtg
cacttcctcaactctgaggaagcacagcagtgggcagcactggtgcgagatgccaccgca
gaaggacaaaatggcaatgacagcacagccccagtcccaaccccagccatgtgccccact
tctccaccatgttcttctgtgactccaacacctaaagcaacccaaccagagatggacctt
cctcaaggttctggaaacttgaaaaaagaagagctggctacacacctggcccaggccatt
gcaggtggggatgagaaagcagcagcccaagtggcggcaatcctggcacagcatcatgtg
gctctcaatgtccagctcttagaggcctggttcccacggggtcccataaggctgcaagtc
acagttgaagatgccacatcggttttatcctcttcgtcgtctgcccatgtctcactgcag
atccacccacactgttccattgcagccctccaggaacaggtgttctcagagttcggtttc
ccaccagctgtgcagcgctgggtcattggccggtgcctgtgtatgcctgaacgaagcctt
gcttcctatggggtctctcaagatggggaccctgcttttctttacttgctctcagccccc
cgagaagtttcaggacacagccctcaacactccaagatggataggaaattaggatgcttg
tttcctcagtcattggagctgcctcataacctccaggcatccagttccagtctcccaagt
ccccctcagcctggctggtcttgcccttcctgcaccttcatcaatgcttcaaaccgccct
ggctgtgagatgtgtagcacccaaaggccctgtgcttgggatccccttactgcaacttcc
acctag
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