Rattus norvegicus (rat): 84573
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Entry
84573 CDS
T01003
Symbol
Otof
Name
(RefSeq) otoferlin
KO
K19949
otoferlin
Organism
rno
Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:
rno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rno04131
]
84573 (Otof)
Membrane trafficking [BR:
rno04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
84573 (Otof)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
Ferlin_C
FerB
FerI
Motif
Other DBs
NCBI-GeneID:
84573
NCBI-ProteinID:
NP_001263649
RGD:
620646
Ensembl:
ENSRNOG00000009967
UniProt:
A0A0G2K867
LinkDB
All DBs
Position
6:31647869..31744476
Genome browser
AA seq
1998 aa
AA seq
DB search
MALIVHLKTVSELRGRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNE
VLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQA
ADGTVGPWDDGDFLGDESLQEEEKDSQETDGLLPGSRPSTRTPGEKSFRRAGRSVFSAMK
LGKTRSHKEEPQRQDEPAVLEMEDLDHLAIRLGDGLDPDSVSLASVTALTSNVSNKRSKP
DIKMEPSAGRPMDYQVSITVIEARQLVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEY
FVFDFHVSPDVMFDKIIKISVIHSKNLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAILS
DPDDISAGLKGYVKCDVAVVGKGDNIKTPHKANETDEDDIEGNLLLPEGVPPERQWARFY
VKIYRAEGLPRMNTSLMANVKKAFIGENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNE
QVVFTDLFPPLCKRMKVQIRDSDKVNDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMY
GSTRNYTLLDEHQDLNEGLGEGVSFRARLMLGLAVEILDTSNPELTSSTEVQVEQATPVS
ESCTGRMEEFFLFGAFLEASMIDRKNGDKPVTFEVTIGNYGNEVDGTSRPQRPRPRKEPG
DEEEVDLIQNSSDDEGDEAGDLASVSSTPPMRPQITDRNYFHLPYLERKPCIYIKSWWPD
QRRRLYNANIMDHIADKLEEGLNDVQEMIKTEKSYPERRLRGVLEELSCGCHRFLSLSDK
DQGHSSRTRLDRERLKSCMRELESMGQQAKSLRAQVKRHTVRDKLRLCQNFLQKLRFLAD
EPQHSIPDVFIWMMSNNKRIAYARVPSKDLLFSIVEEELGKDCAKVKTLFLKLPGKRGFG
SAGWTVQAKLELYLWLGLSKQRKDFLCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQTF
QLRAHMYQARSLFAADSTGLSDPFARVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYG
EAHELRDDPPIIVIEIYDQDSMGKADFMGRTFAKPLVKMADEAYCPPRFPPQLEYYQIYR
GNATAGDLLAAFELLQIGPSGKADLPPINGPVDMDRGPIMPVPVGIRPVLSKYRVEVLFW
GLRDLKRVNLAQVDRPRVDIECAGKGVQSSLIHNYKKNPNFNTLVKWFEVDLPENELLHP
PLNIRVVDCRAFGRYTLVGSHAVSSLRRFIYRPPDRSAANWNTTVRLLRGYHMLCNGGPS
SCPTGEVVVSMEPEVPVKKLETLVKLDATSDAVVKVDVAEDEKERKKKKKKGPSEEAEEE
EPDESMLDWWSKYFASIDTMKEQLRQHETSGIDLEEKEEMDSTEGLKGPVKNKEKSRAAK
EEKKKKNQNPGPGQGSEAPEKKKAKIDELKVYPKELESEFDNFEDWLHTFNLLRGKTGDD
EDGSTEEERIVGRFKGSLCVYKVPLPEDVSREAGYDPTYGMFQGIPSNDPINVLVRIYVV
RATDLHPADINGKADPYIAIKLGKTDIRDKENYISKQLNPVFGKSFDIEASFPMESMLTV
AVYDWDLVGTDDLIGETKIDLENRFYSKHRATCGIAQTYSIHGYNIWRDPMKPSQILTRL
CKEGKVDGPHFGPHGRVKVANRVFTGPSEIEDENGQRKPTDEHVALSALRHWEDIPRVGC
RLVPEHVETRPLLNPDKPGIEQGRLELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVW
NTDEVVLEDDDFFTGEKSSDIFVRGWLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDY
LAAEEKIVMSKKESMFSWDETEYKIPARLTLQIWDADHFSADDFLGAIELDLNRFPRGAK
TAKQCTMEMATGEVDVPLVSIFKQKRVKGWWPLLARNENDEFELTGKVEAELHLLTAEEA
EKNPVGLARNEPDPLEKPNRPDTSFIWFLNPLKSARYFLWHTYRWLLLKLLLLLLLLLLL
ALFLYSLPGYLAKKILGA
NT seq
5997 nt
NT seq
+upstream
nt +downstream
nt
atggccctgatcgtccacctcaagactgtttctgagcttcgaggcagagctgatcggatc
gccaaagtcactttccgaggacagtccttctattcccgggtcctggagaactgcgaggat
gtggctgacttcgatgagacattccggtggccagtggctagcagcatcgacaggaatgaa
gtgttggagattcagattttcaactacagcaaagtcttcagcaacaaactaatcgggacc
ttccgcatggtgctgcagaaggtggtggaggagaatcgggtagaggtgtctgacacgctg
atcgatgacaacaatgctatcatcaagaccagcctaagcatggaggtccggtatcaagcc
gcagatggcacagtaggcccttgggatgatggagactttctgggagatgaatcccttcag
gaggaagagaaagacagccaggagacagatggtctgctacctggctcccgacccagcacc
cggacacccggcgagaagagctttcgaagagcgggaaggagtgtattctcggccatgaaa
ctcggcaagactcggtcccacaaagaggagccccaaagacaagatgagccagcggtgctg
gagatggaggacctggaccacctagccatccggctgggggatgggctggatcctgactca
gtgtctctagcctcggtcactgctctcaccagcaatgtctccaacaaacggtctaagcca
gatattaaaatggaaccgagtgctgggagacccatggattaccaggtcagcatcacagtg
attgaggctcggcagctggtgggtttgaacatggaccccgtggtgtgcgtggaggtgggc
gatgacaaaaaatacacatccatgaaggagtccacaaactgcccttactacaacgagtac
ttcgtctttgacttccacgtctctcctgatgtcatgtttgacaagatcatcaagatctcg
gttatccattctaagaacctgcttcgaagcggcactctggtgggctccttcaaaatggat
gtggggaccgtgtactcccagcctgaacaccagttccatcacaaatgggctatcctgtca
gaccccgatgacatctctgccgggctgaagggctatgtaaagtgtgatgtcgccgtggtg
ggcaagggagacaacatcaagacaccccacaaggccaacgagacagatgaggatgacatt
gaagggaacttgctgctccccgagggcgtgcccccagaacggcagtgggcccggttctac
gtgaaaatttaccgagcagagggactgccccggatgaacacaagcctcatggccaacgta
aagaaggcgttcatcggtgagaacaaggacctcgtcgacccctacgttcaagtcttcttt
gctggacagaagggcaaaacatcagtgcagaagagcagctatgagccgctgtggaatgag
caggtcgtctttacagatctgttccccccactctgcaagcgcatgaaggtgcagatccga
gactccgacaaggtcaacgacgtggccatcggcacccacttcatcgacctgcgcaagatt
tccaacgatggagacaaaggcttcctgcctacgctcggcccagcctgggtgaacatgtac
ggctccacacgcaactacacgctgctggacgagcaccaggacctgaatgagggcctgggt
gagggggtgtccttccgtgcccgcctcatgttgggactggctgtggagatcctagacacc
tccaacccagagctcaccagctccaccgaggtgcaggtggagcaggccacacctgtctca
gagagctgcacagggagaatggaagaatttttcctatttggagccttcctggaagcctca
atgatcgaccggaaaaatggggacaagccagtgacctttgaggtgaccataggaaactat
ggcaatgaagtcgatggtacatcccggccccagaggcctcggccccggaaggaacctggg
gatgaagaagaggtagacctgattcagaactccagtgacgacgagggtgatgaagccggg
gacctggcctcagtgtcctccaccccacctatgaggccccagatcacagacaggaactat
ttccacctgccctacctagagcgcaagccctgcatctacatcaagagctggtggcctgac
cagcggcgccgtctctacaacgcaaacatcatggaccacattgctgacaagctggaagaa
ggtctgaatgatgtccaggagatgatcaaaacggagaagtcctacccggagcgacgcctg
cggggtgtgctagaggaactcagctgtggctgccaccgcttcctctccctctcggacaag
gaccagggtcactcgtcccgcaccaggctggatcgggagcgcctcaaatcctgtatgagg
gagctggagagcatgggacaacaagccaagagcctgagggctcaggtgaagcgacacact
gtacgggacaagctgaggttatgccagaacttcctgcagaagctacgcttcctagctgat
gagccccagcacagcatccccgatgtgttcatttggatgatgagtaataacaaacgtatc
gcctacgcccgcgtgccttccaaagaccttttgttctccattgtggaggaggaattgggc
aaggactgcgccaaggtcaagaccctcttcctgaagctgccaggaaagaggggcttcggc
tcggcaggctggacagtacaggccaagctggaactctacctgtggctgggcctcagcaag
cagagaaaggacttcctgtgtggcctgccttgtggcttcgaggaggtcaaggcagcccaa
ggcctgggtctgcattcctttccgcccatcagccttgtctacaccaagaagcaaaccttc
cagctccgagcccacatgtatcaggcccgaagcctcttcgccgctgacagcactgggctc
tctgatccttttgcccgagtcttcttcatcaaccagagccagtgcacggaggtcctaaac
gagacactgtgtcctacttgggaccaaatgctggtatttgacaacctggagctgtacggt
gaagctcatgagttacgagatgatccccccatcattgtcattgaaatctacgaccaggac
agcatgggcaaagctgacttcatgggccggacctttgccaagcccctggtgaagatggca
gacgaggcatattgcccgcctcgcttcccgccccagcttgagtactaccagatctaccga
ggcaacgccacggccggagacctactggctgcctttgagctgctgcagattggaccatcg
gggaaggctgacctgccacccatcaatggcccagtggacatggacagagggcccatcatg
cctgtgcctgtgggaatccggcccgtgctcagcaagtacagagtggaggtgctgttctgg
ggcctgagggacttaaagagggtgaacctggcccaggtggaccggccacgggtggacatc
gagtgtgcgggaaaaggggtacaatcgtccctgatccacaattataagaagaaccccaac
ttcaacaccctggtcaagtggtttgaagtggacctcccagagaatgagctcctgcaccca
cccttgaacatccgggtggtggactgccgggcctttggacgatacaccctggtgggctcc
catgcagtcagctcactacgacgcttcatctaccgacccccggaccgctcggccgccaac
tggaacaccacagtcaggcttctccggggctaccacatgctgtgcaatgggggcccctct
tcttgccccacaggggaggttgtagtgagcatggaacctgaagtgccagttaagaagctg
gagaccctggtgaagctggatgcgacttctgatgctgtggtcaaggtggatgtggctgaa
gatgagaaggaaaggaagaagaagaaaaagaaaggcccatcagaggaggcagaggaggag
gaacccgatgagagcatgctggattggtggtccaagtactttgcctccattgacacaatg
aaggagcaacttcgacaacatgagacctctgggattgatttggaagagaaggaagaaatg
gatagcactgagggcctgaaggggccagtgaagaacaaggagaagtccagagctgcaaag
gaggaaaaaaagaagaaaaatcagaaccctggccctggccagggatcggaggctcctgag
aagaagaaagccaagatcgacgagcttaaggtgtatcccaaggagctagagtcggagttt
gacaactttgaggactggctgcacacgttcaacctgttacggggcaagactggggatgat
gaggatggctccacagaggaagaacgcatagtaggccgattcaagggttccctctgtgtg
tacaaagtgccactcccggaggatgtgtctcgtgaagctggctacgatcccacctacgga
atgttccagggcatcccaagcaatgaccccattaatgtgctggtccgaatctatgtggtc
cgggccacagacctgcacccggctgacatcaatggcaaagccgacccctatatcgccatc
aagttaggcaagactgacatccgagacaaggagaactacatctccaagcagctcaaccct
gtctttggaaagtcctttgacattgaggcctccttccccatggagtccatgctgacagtg
gctgtgtacgactgggatctggtgggcactgatgacctcatcggagaaaccaagatcgac
ctggaaaaccgcttctacagcaagcaccgtgctacctgcggcatcgcgcagacctattcc
atacatggctataatatctggagagaccccatgaagcccagccagatcctgacccgcctc
tgcaaagagggcaaagtggacggcccccactttggtccccatgggagagtgaaggtcgcc
aaccgtgtcttcacagggccttcagagatagaggatgagaatggtcagaggaagcccaca
gatgagcacgtggcactgtctgctctgagacactgggaggacatcccccgggtgggctgc
cgccttgtaccggagcacgtggagaccaggccgttgctcaaccctgacaagccaggcatt
gagcagggccgcctggagctgtgggtggatatgttccccatggatatgccggcccctgga
acacctctggatatctcccccaggaaacccaagaagtatgagctgcgcgtcatcgtgtgg
aacacagatgaggtggtcctggaagacgacgatttcttcacgggagagaagtccagtgat
atttttgtgagggggtggctgaagggccagcaggaggacaaacaggacacagacgtacat
tatcactccctcacgggtgagggcaacttcaactggcgatacctgttccccttcgactac
ctggcggccgaagagaagatcgttatgtccaagaaggagtccatgttctcctgggatgag
acggagtacaagatacctgcgcggctcaccctgcagatctgggacgctgaccacttctca
gccgatgacttcctgggggccatcgagctggacctgaaccggttcccgaggggcgccaag
acagccaagcagtgcaccatggagatggccaccggggaggtggatgtgcccctggtttcc
atctttaaacagaaacgtgtcaaaggctggtggcccctcctggcccgcaatgagaatgat
gaatttgaactcacgggcaaagtagaggcagagttacacctcctcacggcagaggaggcg
gagaagaacccggtgggcctggctcgcaatgaacctgaccctctagaaaaacccaatcgg
cccgacacaagcttcatctggttcttgaaccctctcaagtctgcccgctacttcctgtgg
catacctaccgctggctgctcctcaaactcctgctgctcctcctcctgctgctgctgctc
gccctgtttctctactctctgcctggctacctggccaagaagatccttggggcctga
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integrated database retrieval system