Rhodococcus opacus PD630: Pd630_LPD04089
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Entry
Pd630_LPD04089 CDS
T03071
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00270
Cysteine and methionine metabolism
roa00450
Selenocompound metabolism
roa01100
Metabolic pathways
roa01110
Biosynthesis of secondary metabolites
roa01230
Biosynthesis of amino acids
Module
roa_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Pd630_LPD04089
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
Pd630_LPD04089
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roa01007
]
Pd630_LPD04089
Enzymes [BR:
roa01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
Pd630_LPD04089
Amino acid related enzymes [BR:
roa01007
]
Aminotransferase (transaminase)
Class II
Pd630_LPD04089
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
NIR_SIR_ferr
PreAtp-grasp
GAPT
Motif
Other DBs
NCBI-ProteinID:
AHK31302
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Position
4282499..4283743
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AA seq
414 aa
AA seq
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MTFSTTPHPLFPGFDDLDLGALSRRTGVKWARAVEAGALPSWVADMDFPVAPEIRDALKD
VIDRGDLGYPNWLGGTPLRAEFARRMSDRYGWQVDPADVREQTDLIQALQLILRLGTRPG
DAVVIQTPNYPPFLATIETMGRRTVEFPFVDTENGWALDFDEFERTLAQNRPKVLVLVNP
HNPTGRVHTRGELERIAELAERYGLLVISDEIHAELIYQPHRHIPFASISEDAASRTVTV
TSAGKAFNLAGLRCAVLHYGPKDLLAVRDNEPPDLYGAVSVIGVVGCLAAWQHGQAWQDT
LIRVLDRNRARVHDVLTRALPEARHHLPEATYLSWVNVSALPVDDPIDRIRRAGHVLVDG
GAPFGKAGDRFIRINFATSETLLDRVLSGITGALTGGHPDPAAPSTQLDPCTPT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgactttctcgacgacaccccaccccctgttcccgggattcgacgacctcgacctcggt
gcgctgtcccggcgcaccggggtgaaatgggcgcgcgcggtcgaagccggggcactcccg
tcgtgggtcgccgacatggactttcccgtcgccccggagatccgcgacgcgctgaaggac
gtcatcgaccgcggcgacctcgggtacccgaactggttgggcggcactcccctgcgtgcc
gagttcgcccggcggatgtccgaccgctacggctggcaggtcgaccctgcagacgtgcgg
gagcagaccgatctgatccaggcgctgcagctgatccttcgtctcggcacccgacccggg
gatgcggtggtcattcagaccccgaactacccgccattcctggcgacgatcgaaacgatg
gggcggcgcaccgtcgaattccccttcgtcgacaccgagaacgggtgggctctcgacttc
gacgagttcgagcggaccctggcgcagaatcgtcccaaggtgctcgtcctcgtcaatccg
cacaatccgacgggtcgagtgcacacgcgcggcgaactcgagcgcatcgccgaactcgcc
gaacggtacggcctgctggtgatcagcgacgagatccacgccgaactgatctaccaaccg
caccggcacatcccgttcgcgtccatcagcgaggacgccgcatcgcggaccgtgacggtc
acgtccgccgggaaggccttcaacctcgccggtctgcgctgcgcggtgctgcattacggt
ccaaaggacctgctggcggtccgggacaacgaaccacccgacctctacggcgcggtgtcg
gttatcggggtcgtcggatgcctcgccgcatggcagcacgggcaggcgtggcaggacacc
ctcatccgcgtcctcgaccgcaatcgcgcacgggtccacgacgtcctgacccgggcgctg
cccgaggcccggcaccacctgcccgaggccacgtatctgagctgggtgaacgtctcggcc
ctgccggtggacgatccgatcgaccgcatccgccgcgccgggcacgtgctcgtcgacggc
ggtgcgcccttcgggaaggccggtgaccggttcatccggatcaacttcgccacctcggag
accctgctcgaccgggtcctgtccggcatcaccggcgcgctcaccggcggacacccggac
cccgccgcgccgtccacccaactcgacccctgcaccccgacgtaa
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