Rhodococcus opacus PD630: Pd630_LPD05188
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Entry
Pd630_LPD05188 CDS
T03071
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
roa
Rhodococcus opacus PD630
Pathway
roa00300
Lysine biosynthesis
roa00550
Peptidoglycan biosynthesis
roa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
roa00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pd630_LPD05188
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pd630_LPD05188
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
roa01011
]
Pd630_LPD05188
Enzymes [BR:
roa01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Pd630_LPD05188
Peptidoglycan biosynthesis and degradation proteins [BR:
roa01011
]
Precursor biosynthesis
Amino acid ligase
Pd630_LPD05188
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AHK32394
LinkDB
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Position
complement(5374047..5375660)
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AA seq
537 aa
AA seq
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MPVPSRPQSASVEVKVTDSLRPAQPVRTTVSALAALAGARVEAPTGTAEHVIVTGVDLRA
QGIIEGDLFAALPGARAHGAEFAADALARGATAILTDEAGFELVSALGSDMPVLVHDDPR
GVLGELSATIYGRPSEKMQVIGITGTSGKTTTSYLVEAALTAAGRTTGLVGTIETRMSGR
RVPSALTTPEAPQLHALFAVMLEQGIDTVVMEVSSHALSLGRVDGVRFDVGAFTNLSQDH
LDFHRDFEDYFAAKARLFAADSSVHAQHAVICVDDVWGQRMADVARGAHSMVTTVATTPE
AEGAVWTAGPATVSPSGSQTFALTTAEGTTLDVELRLPGQYNVANASLAVALCAALGVDP
RDAVEGIAGVDVPGRVQRIDRGQDFLAVVDYAHKPAAVEAVIATLREQVHGRVAVVVGAG
GDRDAGKRPLMGAAAARGADLLIITDDNPRTEDPAKIRAAVREGALGVPESERGQVWEVA
DRAKAIADAVGWAQAGDVVLVAGKGHEIGQEIHGVKYPFDDRDVLGDAIERQVGGAR
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgttccgtcccgcccgcagtcggcgtcagtggaggtgaaggtcacagacagcctt
cgccccgcccagccggtccgtaccacggtgagcgctctggcagcgctcgccggagcgagg
gtcgaggcacccaccggaaccgccgagcacgtgatcgtcaccggggtggatctccgcgcc
caggggatcatcgagggcgatctgttcgcggcccttcccggggcccgcgcgcacggcgcg
gagttcgccgccgacgccctcgcacgcggcgcgaccgcgatcctcaccgacgaggccgga
ttcgagctggtgtccgcactgggctccgacatgccggtgctcgtccacgacgacccacgg
ggcgttctcggtgagctgtccgccaccatctacggccgaccctcggagaagatgcaggtc
atcggcatcaccggaacgtcggggaagaccacgacctcgtacctcgtcgaggccgcgctc
accgccgcggggcggacgaccggtctcgtgggcaccatcgagacccggatgagtggccgc
cgggtgccgagcgcactgacgacccccgaggcgccgcagctccacgccctgttcgccgtg
atgctcgagcagggcatcgacaccgtggtcatggaggtgtccagccacgcgctgtcgctc
ggccgcgtcgacggagtccgcttcgatgtgggcgcgttcacgaacctctcccaggaccac
ctggacttccaccgcgacttcgaggactacttcgccgccaaggcgcggctcttcgcagcc
gattcgtccgtgcacgcacagcacgccgtcatctgtgtcgacgacgtgtgggggcagcgg
atggccgacgtcgcgcggggcgcgcactcgatggtgacgacggtggccaccacgcccgag
gccgagggcgcggtgtggacggcgggcccggcgacggtgtcgccctcgggctcgcagacc
ttcgcgctcaccacggccgagggcaccacactcgacgtggagctccgtctgccggggcag
tacaacgtcgccaacgcctccctcgccgttgcgctgtgcgccgcgctgggtgtcgatccg
cgcgacgccgtcgagggcatcgccggggtcgacgtgccgggccgggtgcagcggatcgac
cgagggcaggacttcctcgccgtcgtcgactatgcgcacaagcctgcagcggtcgaggcc
gtgatcgccacgctgcgcgagcaggtgcacggccgcgtcgccgtcgtcgtgggtgcgggc
ggcgatcgcgacgcaggcaagcggccgctgatgggcgccgcggccgcccgcggagccgac
ctgctgatcatcacggacgacaacccccgcaccgaggatccggcgaagatcagggccgcg
gtccgcgagggcgctctcggagtgcccgaatccgagcggggacaggtgtgggaagtagcg
gaccgagcgaaggcgatcgccgacgccgtcggctgggcgcaggcaggcgacgtggttctg
gtcgcaggcaagggacacgagatcggtcaggagatacacggggtgaagtacccatttgac
gaccgcgacgtactgggcgacgcgatcgagcgacaggtcggaggagcgcgatga
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