Romboutsia sp. CE17: HF520_11485
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Entry
HF520_11485 CDS
T06535
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HF520_11485 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_11485 (nth)
Enzymes [BR:
roc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HF520_11485 (nth)
DNA repair and recombination proteins [BR:
roc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HF520_11485 (nth)
Prokaryotic type
HF520_11485 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Ogg-HhH
RecR_HhH
HHH_5
HHH_8
Tricho_coat
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
QJA09542
UniProt:
A0A6H1X248
LinkDB
All DBs
Position
complement(2402898..2403524)
Genome browser
AA seq
208 aa
AA seq
DB search
MKDVNKILDELQVLYPDAKCELNYTTPFELLIATILSAQCTDVRVNIVTDAMFKKYNTPE
AFNELSLEDIMQEIKTCGLYKSKAQKIKETSRKLCEEYKGQVPDTLEELVKLPGVGRKTA
GVVLSNAFNIPAIAVDTHVFRVANRIGIVNTSTPEKTEFALMEAIPKDRWSHSHHLLIFH
GRRMCKARNPQCEICPVKNDCDYYKRRE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgttaataaaatactagatgaattacaggttttataccctgatgccaagtgt
gagttaaactacacaacaccatttgaacttttaatagctactatattatcggcccagtgt
actgatgtaagagtaaatattgttacagatgcaatgtttaaaaaatataatacgccagaa
gcatttaatgaattaagcttggaagatattatgcaagaaataaaaacatgtggactgtat
aaaagtaaggctcaaaaaataaaagaaacatctagaaaattatgtgaggagtataaagga
caagttccagatactttagaagaattagtaaaattaccaggtgtagggagaaaaactgct
ggtgtagttttaagtaatgcctttaatataccagcaattgcagtggatactcatgtattt
agagttgccaatagaataggaatagttaacacaagtacaccggaaaaaacagaatttgcg
cttatggaagcgataccaaaagatagatggtctcattctcatcacttattaatatttcat
ggaaggagaatgtgtaaagcaagaaatcctcagtgtgaaatttgtccagtaaaaaatgat
tgtgactactataaaagaagggaatga
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