Roseovarius sp. THAF27: FIU89_00685
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Entry
FIU89_00685 CDS
T06352
Symbol
nth
Name
(GenBank) Endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU89_00685 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_00685 (nth)
Enzymes [BR:
roh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
FIU89_00685 (nth)
DNA repair and recombination proteins [BR:
roh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FIU89_00685 (nth)
Prokaryotic type
FIU89_00685 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
EndIII_4Fe-2S
HHH_8
Motif
Other DBs
NCBI-ProteinID:
QFT79108
UniProt:
A0A5P9GVG0
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All DBs
Position
complement(137716..138360)
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AA seq
214 aa
AA seq
DB search
MAKQLDYHTIREIFTRFQESSPEPKGELDHVNAYTLLVAVALSAQATDAGVNRATRELFK
IADTPQKMLDLGEEELIEHIKTIGLYRNKAKNVMKLSRILIDKFDGEVPNSRAALQSLPG
VGRKTANVVLNMWWSYPAQAVDTHIFRVGNRTGIAPGKDVDAVERAIEDHVPVDFQQHAH
HWLILHGRYHCKARAPMCRSCIIRDLCQFEEKTI
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcaactcgactaccacacgatccgcgagatcttcacccggttccaggagtcg
tctcccgaacccaagggcgagctcgaccacgtgaacgcctacacgcttctcgtggccgtg
gcgctctcggcgcaggcgaccgatgcgggggtcaaccgcgccacgcgcgagctgttcaag
atcgccgacaccccgcagaagatgctggacctgggcgaggaagagctgatcgagcatatc
aagaccatcggcctttaccgcaacaaggccaaaaacgtgatgaagctgtcgcgcatcctg
atcgacaagttcgacggcgaggtgcccaattcccgtgccgcgctgcaatcgctgcccggc
gtcgggcgcaagacggccaacgtcgtgctgaacatgtggtggagctatcccgcacaggcg
gtcgacacgcatatcttccgggtcggcaaccgcacgggcatcgccccgggcaaggatgtg
gacgcggtcgaacgcgccatcgaggaccacgtgccggtggatttccagcagcacgcccac
cactggctgatcctgcacggccgctaccactgcaaggcgcgcgccccgatgtgccggtcc
tgcatcatccgcgacctctgccagttcgaggaaaagaccatatga
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