Roseovarius sp. THAF27: FIU89_00925
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Entry
FIU89_00925 CDS
T06352
Symbol
arpA
Name
(GenBank) Antibiotic efflux pump periplasmic linker protein ArpA precursor
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
roh
Roseovarius sp. THAF27
Pathway
roh01501
beta-Lactam resistance
roh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FIU89_00925 (arpA)
01503 Cationic antimicrobial peptide (CAMP) resistance
FIU89_00925 (arpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
roh03036
]
FIU89_00925 (arpA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roh02000
]
FIU89_00925 (arpA)
01504 Antimicrobial resistance genes [BR:
roh01504
]
FIU89_00925 (arpA)
Chromosome and associated proteins [BR:
roh03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FIU89_00925 (arpA)
Transporters [BR:
roh02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FIU89_00925 (arpA)
Antimicrobial resistance genes [BR:
roh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FIU89_00925 (arpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-barrel_RND
RND-MFP_C
BSH_RND
Beta-barrel_RND_2
HH_MFP_RND
BSH_CusB
HH_EMRA
HH_AAEA_pHBA
YknX_C
BSH_CzcB
HH_YBHG
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
QFT79155
LinkDB
All DBs
Position
185831..187036
Genome browser
AA seq
401 aa
AA seq
DB search
MMNRSILAIATVVLGLTVSSLFAGRALSQQAQDPVPVVVVTLQAKTVTLTSTLPGRVAAS
AEAEVRPQVNGIITERLFREGAFVEAGDALYRIDSATYSAAVEQAQAAVTQARVQLDAAE
VEAERLVELRERNVTSERAFDEAKAVRDTAAAAVEVAEAQLRSAEIELERTTIKARLSGE
IGLARTSPGALVTASQAEPLAVIREIDPVYVDVTQSAADLLRWTRGQTEDQLTNADTTVR
LTLADGSEYDETGTITAAEPNVDPQTGVVVLRLQFDNPDRLLLPGMYVQVEMPVGTAEDV
LLVPQEAVQRDRRGRPFTWVVTAENVVEERQVSILQDRGADWVVNGGLQDGDRVVVAGFQ
KTGVGATVAPEERPAPEAEATGDATGDATEEPAEAGEKTSP
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccgctccatcctagccatcgcaaccgtcgttctgggcctgaccgtgtcaagc
ctgttcgccggacgcgccctatcgcagcaggcacaggacccggtgccggtcgtggttgtc
accttgcaggcgaagacggtgacgctgacctcgacgcttccggggcgggtggccgcatcg
gcggaagcggaggtgcgtccgcaggtcaacgggatcatcacggaacggctgttccgggaa
ggcgcatttgtcgaggccggcgacgcgctttatcgcatcgattccgccacttactccgcc
gcggtcgaacaggcgcaggcggcggtgacgcaggcgcgggtgcagctggacgcggcggag
gtcgaggccgaacggctcgtggagctgcgcgagcgcaacgtgacgagcgaacgggccttc
gacgaggcaaaggcggttcgggacaccgccgcggcagcggtggaggtggccgaggcgcag
ttgcgctcggcggagatcgagctggaacgcaccacgatcaaggcccgcctttcgggcgag
atcggcttggcgcggaccagccccggcgcgctggtgacggccagccaggccgagccgctt
gccgtgatccgggagatcgacccggtctacgtggacgtgacccaatcggctgccgacctg
ctgcggtggacgcgcggacagaccgaggaccagttgaccaacgccgatacgacggtgcgg
ctgacgctggcggacgggtcggaatatgacgagaccggcacgatcaccgccgcggagccg
aacgtggatccgcagaccggcgtggtggtgctgcgcctgcagttcgacaaccccgaccgg
ctgctcttgccggggatgtacgttcaggtcgagatgcctgtcggtaccgccgaggacgtg
ctgctggtgccgcaggaagctgttcagcgcgaccggcgcgggcgcccgtttacatgggtt
gtgacggccgagaatgtggtcgaggagcgccaggtgagcatccttcaggaccgcggtgcc
gactgggtggtcaacggcggcctgcaggacggcgaccgcgtggtcgtcgccgggttccag
aagaccggcgtcggtgccaccgtggcccccgaggaacgcccggcccccgaggccgaggcg
accggcgacgcaaccggcgacgcaaccgaagagcctgccgaggcgggcgagaagacatcc
ccataa
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