Roseovarius sp. THAF27: FIU89_17775
Help
Entry
FIU89_17775 CDS
T06352
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00270
Cysteine and methionine metabolism
roh00450
Selenocompound metabolism
roh01100
Metabolic pathways
roh01110
Biosynthesis of secondary metabolites
roh01230
Biosynthesis of amino acids
Module
roh_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FIU89_17775 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FIU89_17775 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roh01007
]
FIU89_17775 (patB)
Enzymes [BR:
roh01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
FIU89_17775 (patB)
Amino acid related enzymes [BR:
roh01007
]
Aminotransferase (transaminase)
Class II
FIU89_17775 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QFT82479
LinkDB
All DBs
Position
3553758..3554927
Genome browser
AA seq
389 aa
AA seq
DB search
MTFDDPIERRGTNCSKWDKMEQIYGVPAEEGLAMWVADMDFRPPQAVSDALRGMLDPGIF
GYYGDDSGYRRAICWWMETRHGWKVDPSWIFTTHGLVNGTGMCVDAFTDPGDGVVLFTPV
YHAFARVITSAGRRVVECPLVDEDGRYRMDFAAYDEILDGSEKLLVLCSPHNPGGRVWTR
EELEGVAAFAKCHDLVLVSDEIHHDLVYPGHTHTVMAHIDGIADRLVMMTATTKTFNIAG
SHSGNVIIADESLRARFAARMAGLGLSPNSFGLVMAEAAYSSEGAAWVDDLMLYLDGNRK
LFDAGINAIPGLRSMPLEATYLSWVDFSGTGMGREEFTARVEKTAKIAANHGPTFGTGGE
SFLRFNIATQRARVQEAVARLQDAFSDLQ
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
ttgactttcgacgacccgatcgagcgacgcggcacaaattgcagcaaatgggacaagatg
gaacagatctatggcgtccccgccgaggaggggctggccatgtgggtcgccgacatggat
ttccgcccgccacaggcggtcagcgacgcgctgcgcgggatgctcgatcccggcatcttc
ggctattacggcgatgacagcggctatcgccgggcgatctgctggtggatggaaacccgc
cacggctggaaggtggacccgtcctggatcttcaccacccacgggctcgtgaatggcacc
ggcatgtgcgtcgacgccttcaccgatcccggcgacggggtggtgctgttcacgcccgtc
taccatgccttcgcgcgggtcatcacctcggcagggcgccgggtggtggaatgcccgttg
gtcgatgaggacggccgctaccggatggatttcgccgcctacgacgagatcctcgacggg
tcggaaaaactgctggtgctctgctcgccgcacaatcccggcggccgcgtctggaccagg
gaagaactggagggcgtcgccgcgttcgccaagtgtcacgacctcgtgctggtgtccgac
gaaatccaccacgatcttgtctacccggggcacacgcataccgtcatggcccatatcgac
ggtatcgccgaccgcttggtgatgatgacggcaaccaccaagaccttcaacatcgccggt
tcgcattccggcaatgtcatcatcgcggacgagagcctgcgcgcgagattcgccgcgcgc
atggccgggctcggcctgtcgcccaattccttcggcctcgtcatggccgaggccgcctat
tcatccgaaggggcggcctgggtcgatgacctgatgctctatctcgatggcaaccggaaa
ctgttcgacgcggggatcaacgccatccccggcctgcggtccatgccgctcgaggcgacg
tacctgtcctgggtcgacttctccggcaccggcatgggccgagaggaattcaccgcgcgg
gtcgaaaagacggcaaagatcgccgccaatcacggacccaccttcgggaccggcggcgaa
agcttcctgcggttcaacatcgccacgcagcgcgcgcgcgtgcaagaggctgtcgcgcgg
ctacaggacgcgttctcggaccttcaatag
DBGET
integrated database retrieval system