KEGG   Roseovarius sp. AK1035: RAK1035_4001
Entry
RAK1035_4001      CDS       T05517                                 
Name
(GenBank) Coupling protein VirD4, ATPase required for T-DNA transfer
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
rok  Roseovarius sp. AK1035
Pathway
rok03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rok00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RAK1035_4001
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rok02044]
    RAK1035_4001
Enzymes [BR:rok01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     RAK1035_4001
Secretion system [BR:rok02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   RAK1035_4001
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind DEAD
Other DBs
NCBI-ProteinID: AWZ22656
LinkDB
Position
unnamed:30299..32299
AA seq 666 aa
MGKARIATGVLLVTLVTAAMGYTIASAVLTYQDLGFGAEIDFAYIAQNYLAILDRRPEDA
QLIHLIIGSFAAAGLMLSLALSGSALTRFGQTHWQTAREMKANGFFGAPGTGFILGKLGT
PGSRANYICSKVFPHALIVAPTGRGKTTGFVIPNLLTWQGSAVTLDVKGECFEATARHRA
AQGDKVYRFAPTDWEGKRTHRYNPLLRIFELKDPARQQMELQLLATLFLQSDNDRVQGLL
KGGIDLFVAAGLLAFQRKRPTLGEIYRIAASGGNKQKEYFARGHEVDNRAAKLIFTRLAS
TNNDTLTSYVSLLMTSGLDQWQNPAIDEATAVSDFDFRTIRKKPFSVYLVVQPLMVKPLA
PLIRLFFSDLLSAMQEKDPGPDEPWPVMIMLDEFNRLGKMPIVVESIETLRTYRGHLAVV
TQTIPALDEIYGENTRRALQGNAGVKLYLTPSDEKTVEELSKAVGKTTKTVITRSQSIGK
NPFEGRSQSTRTEESSLLPEDEARRLPLDEIVMVIDAQMPVRAKRIQYFDDRLFKAIHAT
QTGELPFPEPGGGGPQGNLPLSVRAMPMTPPANGPSGSDAVVETTRQEAGSQTSGQTDVA
PKKTAPVVYAVVAEEQRQMEMDFGGRVADAETVGVDDEAQVRSAVDGLDEMEAILQEGDG
EKLVAR
NT seq 2001 nt   +upstreamnt  +downstreamnt
atgggaaaagcgcggatcgcaacaggggtcttgctggtgacgctggtgaccgccgccatg
ggctataccatcgcctcggcggtgctgacctaccaggatctcgggttcggggccgagatc
gacttcgcctatatcgcgcagaactatctggcgatcctggaccgccgcccggaggacgcg
caacttattcacctgatcatcggcagcttcgccgccgccggcctgatgctgagcctcgcc
ctttcaggctcggccctgacacgctttggccagacccattggcagaccgcgcgcgagatg
aaggccaatgggttcttcggggcgccagggaccgggttcatcctcggcaagctggggacg
ccgggctcccgcgccaattacatttgctcgaaggtcttcccccatgcgctgatcgtggcc
cccacgggccgtggcaagaccacgggcttcgtcattccgaacctgctgacctggcaaggc
tccgccgtgacgctcgatgtgaagggcgaatgtttcgaggccacggcccggcatcgcgcc
gcccagggcgacaaggtctatcgctttgcccccaccgattgggagggcaagcgaacccat
cgctacaacccgctcttgcgcatcttcgaactgaaagaccctgcccgccagcagatggaa
ctgcagcttctggcgacgctcttcctgcaaagcgacaatgaccgggtgcaggggctcctc
aagggcgggattgatctctttgtggcagcaggcctgttggccttccagcgcaaacgtccg
accttgggcgagatctatcgcatcgcggcctcgggtgggaacaagcagaaggaatacttc
gcgcgcggccacgaggtcgacaacagggccgccaagctgatcttcacgcggctggcgtcc
accaacaacgacacgctgacctcttatgtttcgcttttgatgacctcggggctcgatcaa
tggcagaacccggccatagacgaggcgacggcagtgtcggattttgatttccgcacgatc
cgcaagaagcccttttcggtctatctcgtggtccagcctctcatggtgaagccgctcgcg
ccgctgatccggctgtttttctccgacctgctctcggccatgcaggaaaaggatcccggg
ccagacgagccgtggccagtgatgatcatgctcgacgagttcaaccgtctcggaaaaatg
cccatcgtggtcgaaagcatcgagaccctgcgcacttatcgaggtcaccttgccgtggtc
acccaaaccatccccgccctcgatgaaatctacggcgagaacacccgccgcgccctgcag
ggcaacgcgggcgtgaagctttacttgacaccttcggatgaaaagaccgtcgaggagctg
agcaaggcggtcggcaagaccacgaagaccgtcatcacgcgatcccagtccatcggcaag
aacccctttgaagggcgcagccaatccacacggactgaagagagctcgttgttgcccgaa
gatgaggcgcgccgcctgccgctcgacgagatcgtcatggtcatcgatgcccagatgccc
gtccgtgcaaagcggatccaatattttgacgatcggctgttcaaggcgatccatgcgacg
cagacgggcgagttgccgtttccggagccggggggagggggaccgcaggggaacctgccg
ctgagtgtgcgcgccatgccgatgactccgccagcgaacggaccaagtgggtctgacgcc
gttgtggagaccacacgccaagaagcgggtagtcaaacgtcagggcaaaccgacgtcgca
ccaaaaaagactgcgcctgtcgtttacgccgtcgtcgcggaggaacagcgacagatggag
atggattttgggggccgagttgcggatgccgagacagtgggcgtggatgatgaggcacag
gtgcgctccgccgtcgatggcttggacgaaatggaagcgatcttgcaggagggggatggc
gaaaagctggttgctcgatag

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