Roseimicrobium sp. ORNL1: G5S37_13340
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Entry
G5S37_13340 CDS
T06460
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
roo
Roseimicrobium sp. ORNL1
Pathway
roo01501
beta-Lactam resistance
roo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
roo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
G5S37_13340
01503 Cationic antimicrobial peptide (CAMP) resistance
G5S37_13340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
roo03036
]
G5S37_13340
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roo02000
]
G5S37_13340
01504 Antimicrobial resistance genes [BR:
roo01504
]
G5S37_13340
Chromosome and associated proteins [BR:
roo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
G5S37_13340
Transporters [BR:
roo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
G5S37_13340
Antimicrobial resistance genes [BR:
roo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
G5S37_13340
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
HH_MFP_RND
RND-MFP_C
BSH_CzcB
Beta-barrel_RND_2
YknX_C
BSH_CusB
HH_AAEA_pHBA
Phage_Mu_Gam
BSH_LcnD
HH_YBHG
Motif
Other DBs
NCBI-ProteinID:
QIF02467
LinkDB
All DBs
Position
complement(3338198..3339460)
Genome browser
AA seq
420 aa
AA seq
DB search
MTSPTRTPEIPSPSAGRIQRQWHPLLLVPMLALALTGCEKKAAGPPHGMMMGGPLEVGVM
TLAPTPITLTQDLPGRTSAFRVAEVRARVNGIVLKRHFTEGSDVKEGQLLYEIDPAQYQA
ELDRAIGALARSEANAEAARIKEERYKQLVSTKAISQQELDDATASLHAFEADIISGKAA
VQAAKINLGYTKVTSPVSGRVGISQVTEGAYVQAGTATLLATVQQLDPMYVDVTQSSNDL
MRLKKALAAGELSNAKQAQAKVELLLDDGAVYKQQGTLQFSDISVNPSTSSVTVRAIFPN
PGAELLPGMFVRARLVEGSKTDALLVPQFAVSRNSKGEATAFVVGAEDKAEIRVVNADRT
VGSQWLITDGLKSGDRIIMNNLQKLRPGAPVKTVPYAPPGAGAPGAPAGKPGTGANTAAR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccccacccgtacccccgaaatcccctcaccctccgcgggccgcatccagcga
cagtggcaccccctcctactggtgccgatgctcgccctggcactgactggttgcgaaaag
aaggccgctggtccgcctcacggcatgatgatgggtggcccgctcgaagtcggcgtgatg
acgctggctccgacgccgatcacgctcacgcaggatctgcccggccgcacctccgccttc
cgcgtggcggaagtccgcgcgcgtgtgaacggcatcgtgctcaagcgccacttcaccgaa
ggcagcgatgtgaaggaaggccagttgctctatgagatcgatcctgctcagtaccaggcc
gagctcgatcgcgcgattggcgccctcgcccgctccgaagcgaacgcggaagcggctcgc
atcaaggaggagcgctacaagcaacttgtctccaccaaggccatcagccagcaggaactg
gatgacgccacggcttccctgcatgccttcgaagcagacatcatctccggcaaggccgcg
gtgcaggctgcgaaaatcaaccttggctacaccaaggtgacctcgccagtgagtggtcgc
gtgggcatctcccaagtgaccgagggcgcttatgtgcaagccggtaccgccacgttgctg
gccaccgtgcagcagcttgatcccatgtatgtggacgtgacgcagtccagcaacgatctg
atgcgcctgaagaaagcgctggctgccggtgaactgagcaatgcgaagcaggcacaggcg
aaagtggaactgctgttggatgacggcgccgtgtacaagcagcaaggcacactgcagttc
tccgacatctcggtgaatcccagcacgagttcggtgacggtgcgtgccatcttcccgaat
cctggtgccgaactgctccccggcatgttcgtccgcgcacgcctggtggaaggcagcaag
acagatgcgttgctcgtgccgcagttcgcggtttcgcgcaactccaagggcgaggccacg
gcctttgtcgtaggtgccgaggacaaggcagaaatccgcgtggtgaacgcagaccgcacc
gtgggcagccagtggctgatcaccgacggactcaaatccggcgatcgcatcatcatgaac
aacctccagaagctgcgccccggcgcaccggtgaagacggtgccttatgcgccgcccgga
gccggagcccctggcgcacctgccggcaagcctggcacgggagccaataccgccgcccgc
taa
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