Rhodococcus opacus B4: ROP_42330
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Entry
ROP_42330 CDS
T00882
Symbol
nth
Name
(GenBank) putative endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rop
Rhodococcus opacus B4
Pathway
rop03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rop00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ROP_42330 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rop03400
]
ROP_42330 (nth)
Enzymes [BR:
rop01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ROP_42330 (nth)
DNA repair and recombination proteins [BR:
rop03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ROP_42330 (nth)
Prokaryotic type
ROP_42330 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAH52480
NITE:
ROP_42330
UniProt:
C1B9X7
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All DBs
Position
4557756..4558511
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AA seq
251 aa
AA seq
DB search
MRGRTRSRAAKQEETRLGLVRRARRMNRRLAEAFPHVYCELDFTTPLDLAVATILSAQCT
DVRVNMVTPALFARYPDAKAYAEAERTELEEYIRSTGFYRNKTNSLIGLGQALLERFDGE
VPGNLKDLVTLPGIGRKTANVILGNAFDVPGITVDTHFGRLVRRWKWTEEEDPVKVEHAI
GALIERKEWTLLSHRVIFHGRRVCHARKPACGVCVLAGDCPSYGLGPIDPDVAAGLVRGP
ETEHLLRLAGR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtggacgcacccgttcgcgggccgcgaagcaggaagagacccggctcggactcgtc
cggcgcgcccggcggatgaaccgcaggctcgccgaggccttccctcacgtctattgcgaa
ctcgacttcaccacccccctggacctcgccgtcgcgacgatcctgtccgcgcagtgcact
gacgtgcgggtcaacatggtgacgccggcactgttcgcccgctaccccgacgcgaaggcg
tatgcggaggcggagcgcaccgaactcgaggagtacatccggtccacgggtttctaccgc
aacaagacgaactctctgatcgggctcgggcaggctctgctcgagcgattcgacggcgag
gtccccggcaatctgaaggatctcgtgacgctgcccgggatcggccggaagacggccaac
gtgattctcggcaacgcgttcgatgtgcccggaatcacggtcgacacccacttcgggcgg
ctcgtccggcggtggaaatggaccgaggaggaagacccggtcaaggtcgagcacgccatc
ggcgccctgatcgagcgcaaggagtggacgctgctctcgcaccgggtgatcttccacggc
agacgcgtctgccatgcacgcaagcccgcctgcggggtgtgtgtgctcgcaggcgactgt
ccgtcgtacgggctcggcccgatcgaccccgatgtcgccgccggactggttcgtggaccg
gagacggagcatctgctgcgtctggccggcaggtga
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integrated database retrieval system
