Raoultella ornithinolytica B6: RORB6_10720
Help
Entry
RORB6_10720 CDS
T02625
Symbol
rumB
Name
(GenBank) 23S rRNA methyluridine methyltransferase
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
ror
Raoultella ornithinolytica B6
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ror03009
]
RORB6_10720 (rumB)
Enzymes [BR:
ror01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
RORB6_10720 (rumB)
Ribosome biogenesis [BR:
ror03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RORB6_10720 (rumB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_12
Cons_hypoth95
Methyltransf_4
Methyltransf_15
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
AGJ86830
LinkDB
All DBs
Position
complement(2345926..2347056)
Genome browser
AA seq
376 aa
AA seq
DB search
MHCALYDAGRCRSCQWLERPLTQQLASKMADLRTLLADSPVATWFEPVSGPEAGFRNKAK
MVVSGSVERPLLGMLHRDGSPEDLTDCPLYPASFAAVFAVLKPFIARAGLTPYNVARRRG
ELKYLLLTESQLDGGMMLRFVLRSPTKLAQLRAALPWLQAQLPQLKVITANIQPVHMAIM
EGEEEILLSEQAALAENFNGVPLWIRPQSFFQTNPAVAGQLYATARDWVRQLPVNHMWDL
FCGVGGFGLHCATPEMRLTGIEIAPEAIASAKQSAAELGLTNLHFQALDSTQFATAEGEI
PDLVLVNPPRRGIGRELCDYLCRMAPPFIIYSSCNAQTMAKDIARLPGYRVERVQLFDMF
PHTAHYEVLTLLVREV
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcgcactctatgacgcgggccgctgtcgctcctgtcagtggctggaacggccg
ttaacacaacagctcgccagtaaaatggccgatctcagaacgctgttggcggacagcccg
gtggcgacatggtttgagccggtttccggcccggaagccggttttcgcaacaaagctaaa
atggtggtcagcggcagcgttgaacgtccgctgctggggatgctgcaccgcgatggcagc
ccggaagacctgaccgactgtccgctctatccggccagttttgcagcggtatttgccgtg
ctgaaaccgtttatcgcccgcgccggattaacgccctataacgttgcccgcaggcgcggc
gagctgaagtatctgctgttaacggaaagccagctggatggcggcatgatgctgcgtttt
gtgctgcgttccccgacgaaacttgcgcagctccgcgccgcgctgccgtggctgcaggcg
cagctgccgcagttgaaggtgattaccgccaatattcagccggtgcatatggccattatg
gaaggcgaagaggagattctcctcagcgagcaggcggcgctggcggaaaactttaacggc
gtaccgctgtggatccgcccgcagagcttctttcaaacgaatcctgccgttgccggccag
ctgtatgcgaccgcccgcgattgggtacgccagctgccggtcaatcatatgtgggacctg
ttctgcggagtggggggctttggcctgcactgcgccacgccggaaatgcgcctgaccggg
attgagattgcgccggaggcgatcgccagcgcgaagcagtctgccgccgaactgggcctg
accaaccttcattttcaggcgctggactcgacgcagtttgccaccgctgagggcgagatt
cctgacctggtgctggtcaacccgccgcgccgcgggatcggccgcgagctgtgcgactat
ttatgccgtatggcgccgccctttattatctactccagctgtaacgcgcagacgatggcg
aaagatatcgcgcggctgccgggctatcgggttgagcgggtgcagctgtttgatatgttc
ccccacaccgcccactacgaagtgctgacgctgctggttcgcgaagtttaa
DBGET
integrated database retrieval system
