Raoultella ornithinolytica B6: RORB6_17455
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Entry
RORB6_17455 CDS
T02625
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
ror
Raoultella ornithinolytica B6
Pathway
ror00270
Cysteine and methionine metabolism
ror00450
Selenocompound metabolism
ror00670
One carbon pool by folate
ror01100
Metabolic pathways
ror01110
Biosynthesis of secondary metabolites
ror01230
Biosynthesis of amino acids
ror04981
Folate transport and metabolism
Module
ror_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ror00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RORB6_17455 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RORB6_17455 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RORB6_17455 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RORB6_17455 (metH)
04980 Cobalamin transport and metabolism
RORB6_17455 (metH)
Enzymes [BR:
ror01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RORB6_17455 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CdhD
Motif
Other DBs
NCBI-ProteinID:
AGJ88172
LinkDB
All DBs
Position
complement(3833616..3837299)
Genome browser
AA seq
1227 aa
AA seq
DB search
MSSKVEQLHQQLKKRILVLDGGMGTMIQGYRLSEEDFRGERFADWPCDLKGNNDLLVLSK
PEVITTIHNAYFEAGADIIETNTFNSTTIAMADYQMESLSAEINFVAAKLARACADEWTS
RTPEKPRYVAGVLGPTNRTASISPDVNDPAYRNITFDGLVEAYRESTKALVEGGVDLILI
ETVFDTLNAKAAIFAVKEEFEALGVELPIMISGTITDASGRTLSGQTTEAFYNSLRHADA
LTFGLNCALGPDELRQYVQELSRIAECYVTAHPNAGLPNAFGEYDLDADTMAAQIREWAE
SGFLNIVGGCCGTTPEHIAAMTRAVTGLAPRVLPEIPVACRLAGLEPLNIGDDSLFVNVG
ERTNVTGSAKFKRLIKEEKYNEALDVARQQVESGAQIIDINMDEGMLDAEAAMVRFLNLI
AGEPDIARVPIMIDSSKWEVIEKGLKCIQGKGIVNSISMKEGVEAFVEHAKKVRRYGAAV
VVMAFDEIGQADTRARKIEICRRAYKILTEEVGFPPEDIIFDPNIFAVATGIEEHNNYAQ
DFIGACEDIKRELPHALISGGVSNVSFSFRGNDPVREAIHAVFLYYAIRNGMDMGIVNAG
QLAIYDDLPVELRDAVEDVILNRHADGTERLLELAEKYRGSKTDDSANAQQAEWRSWDVK
KRLEYSLVKGITEFIELDTEEARQQAARPIEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK
SARVMKQAVAYLEPYIEASKEKGSSNGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIIDL
GVMVPADKILKTAREVNADLIGLSGLITPSLDEMVNVAKEMERQGFTIPLLIGGATTSKA
HTAVKIEQNYSGPTVYVQNASRTVGVVSALLSDTQHDDFVARTRREYETVRIQHARKKPR
TPPVTLAAARDNDLAFDWASYTPPVAHRLGVQCVEASIETLRNYIDWTPFFMTWSLAGKY
PRILEDEVVGEEAKRLFHDANEMLDKLSAEKTLNPRGVVGLFPANRVGDDIEIYRDETRT
HVLTVSHHLRQQTEKVGFANYCLADFVAPKLSGKADYLGAFAVTGGLEEDALAEAFDAQH
DDYNKIMVKAIADRLAEAFAEYLHERVRKVYWGYAANENLSNEELIRENYQGIRPAPGYP
ACPEHTEKAVIWELLDVEAHTGMKLTESFAMWPGASVSGWYFSHPDSKYYAVAQIQRDQV
EDYARRKGMTPAEVERWLAPNLGYDAD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaaagttgaacaactgcatcagcagttaaaaaaacgtattctggttctggat
gggggcatgggcaccatgatccagggctatcgtctgagtgaagaggacttccgcggcgaa
cgctttgccgactggccgtgcgatctgaaaggcaataacgatctgctggtgctcagtaag
ccggaggtgataaccactatccataacgcctactttgaggcgggggcggatatcattgaa
accaacacctttaactcgacgactatcgcgatggcggattaccagatggaatccctgtcg
gcggaaatcaactttgtcgcggcaaagctggcgcgcgcctgcgccgatgagtggacttcc
cgcacgccggaaaaaccgcgctacgtcgcgggcgtgctcggcccgaccaaccgcaccgct
tctatttcccccgatgttaacgacccggcctaccgcaatattacctttgatgggctggtg
gaggcttaccgcgagtccaccaaagcgctggtggaagggggcgttgacctgattctgatc
gagaccgtgttcgataccctgaacgccaaagcggcgatcttcgccgtgaaagaggagttt
gaggcgctgggcgttgaactgccgatcatgatctccggtaccatcaccgacgcctccggg
cgtacgctctccgggcaaacgaccgaagccttttacaactcgctgcgccacgccgatgcg
ctcaccttcggcctgaactgcgcgctggggccagatgagctgcgccagtacgtgcaggag
ctgtcgcgcattgccgaatgctatgtcactgcacaccccaatgccgggctgccgaacgcc
tttggggaatacgatctggacgctgacaccatggcggcgcagattcgcgaatgggcggaa
tcgggcttcctgaacatcgtcggcggctgctgcggcaccacgccggaacatatcgccgcc
atgacgcgcgccgttacgggcctcgcgccgcgcgtgctgccggagatcccggtcgcctgc
cgtctggccggcctggaaccgctgaatatcggcgacgacagcctgtttgttaacgtcggc
gagcggaccaacgtgaccggttcagctaaattcaagcgcctgattaaagaagaaaaatat
aacgaagcgctggacgttgcccgtcaacaggtggaaagcggcgcgcagattatcgatatc
aacatggatgaggggatgctcgacgctgaagcggcgatggtgcgtttccttaatctgatc
gccggcgagcctgatatcgcccgggtaccgattatgatcgactcctcgaaatgggaggtc
atcgaaaagggtctgaaatgtattcagggcaaaggtatcgtcaactccatctcgatgaaa
gagggcgtagaggccttcgttgagcatgcgaagaaggtgcgtcgctacggcgctgccgtg
gtggtgatggcctttgatgaaattggccaggccgatacccgcgcgcggaaaatcgaaatt
tgccgccgggcgtacaagattctgaccgaagaggtgggcttcccgccggaagatattatt
tttgaccccaatatcttcgccgtcgccaccggcattgaagagcacaacaactacgcgcag
gactttatcggcgcctgtgaagacattaaacgcgagctgcctcacgcgctgatttccggc
ggcgtctcgaacgtctccttctcattccgcggcaacgatccggttcgcgaagcgattcac
gccgtcttcctgtactacgccatccgtaacggcatggatatggggatcgttaacgccggc
cagctggcgatttatgacgatctgccggtggaactgcgcgatgccgttgaagacgtgatc
ctcaaccgtcatgctgacggcaccgagcgtctgctggagctggcggaaaaataccgcggt
agcaaaacggacgactccgccaacgcccagcaggcggaatggcgtagctgggacgtgaaa
aaacggcttgaatactcgctggtaaaaggcattaccgagtttatcgagctggataccgaa
gaggcgcgccagcaggccgctcgtccgatagaagtgattgaaggcccgctgatggacggc
atgaacgtggtcggcgatctgttcggcgaaggcaaaatgttcctgccgcaggtggtaaag
tcggcccgcgtgatgaaacaggcggtcgcctatctggaaccgtatattgaagccagcaag
gaaaagggctccagcaacggcaagatggtcattgcgaccgtgaaaggcgacgtccacgac
atcggtaaaaatatcgttggcgtggtgctgcagtgcaataactacgaaattatcgatctt
ggcgtgatggtgccggcggacaaaatcctcaaaaccgcccgcgaagtgaatgccgacctg
attggcctctccgggctgattaccccgtcgctggacgaaatggtcaatgtggcgaaagag
atggaacgccagggctttacgattcctctgctgattggcggagccacgacgtcgaaggcc
catacggcggtcaaaatcgagcagaactacagcggcccgacggtctacgttcagaatgcc
tcgcgcaccgtgggcgtggtctcggctctgctctccgacacgcagcacgatgattttgtt
gcgcgcacgcgtcgcgagtacgaaaccgtgcgtatccagcacgctcgcaagaaaccgcgc
acgccgccggtgaccctggctgccgctcgtgataacgatctggcctttgactgggccagc
tacacgccgccggttgcccatcgtctgggcgtgcagtgcgtggaagccagcatcgaaacc
ctgcgtaactacatcgactggacgccattctttatgacctggtcgctggccggcaaatac
ccgcgtatcctcgaagacgaggtggtgggcgaagaagcgaagcggttgttccacgatgcg
aacgagatgctggataaactgagcgcagagaagacgctgaatccgcgcggcgtggtgggg
ttattcccggccaaccgggtgggggatgatattgaaatctaccgcgatgaaacccgcacc
catgtgctgacggtcagccaccatctgcgtcagcagacggaaaaagtcggctttgccaac
tactgccttgccgattttgtggcgccgaagctcagcggcaaagctgactacctcggcgcg
tttgcggtgaccggcgggctggaagaggacgcgctggcggaagcgtttgatgcgcagcac
gatgattacaacaagatcatggtcaaagccatcgccgaccgtctggcggaagcgtttgcc
gaatacctgcatgaacgtgtgcgtaaggtctactggggctacgcggcgaatgagaacctc
agtaacgaggagctgatccgcgaaaactaccaggggattcgccctgcgccgggctacccg
gcctgtccggagcacaccgaaaaagcggtgatctgggaactgctggatgtcgaggcgcat
accggcatgaagctgaccgagtcgttcgccatgtggccgggcgcatcggtttccggctgg
tacttcagccatcctgacagtaagtattacgcggtggcgcaaattcagcgcgatcaggtg
gaagattatgcccggcgtaaagggatgacgcctgcggaagttgaacgctggctggcgcca
aacctgggatatgacgcggactag
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