Roseomonas sp. FDAARGOS_362: CTJ15_16540
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Entry
CTJ15_16540 CDS
T05160
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ros
Roseomonas sp. FDAARGOS_362
Pathway
ros03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CTJ15_16540 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ros03400
]
CTJ15_16540 (nth)
Enzymes [BR:
ros01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CTJ15_16540 (nth)
DNA repair and recombination proteins [BR:
ros03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CTJ15_16540 (nth)
Prokaryotic type
CTJ15_16540 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ATR21752
UniProt:
A0A2D2H6T4
LinkDB
All DBs
Position
complement(2612216..2612887)
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AA seq
223 aa
AA seq
DB search
MPPAQALRFLEALRDANPDAQTELHYGNPFTLLVAVVLSAQTTDAAVNRATDPARGGLFA
VADNPAAMVALGVEGVGGHIRSIGLWQGKARNVVALSQMLLDRHGGEVPDSREALEALPG
VGRKTASVVLSVAFHQPAMAVDTHIFRLGNRTGLAPGKDVREVEEALLKRCPPEWLRDAH
HWLILHGRYVCKARLPECWRCAAREFCNYRDKVLVPPQRSRTA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccgcccaggccctgcgcttcctggaggcgctgcgcgacgccaatccggatgcg
cagaccgagctgcattacggcaaccccttcaccctgctggtggccgtggtcctttccgcc
cagaccaccgatgcggcggtgaaccgggcgaccgacccggcgcgcggcggcctcttcgcg
gtggcggacaaccccgccgccatggtggccctgggcgtggagggcgtgggcgggcacatc
cgcagcatcgggctttggcaaggcaaggcgcgcaacgtggttgccctgtcgcagatgctg
ctggaccggcatggcggggaggtgcccgacagccgcgaggcgctggaggccctgcccggc
gtcggccgcaagaccgcctccgtggtgctgagcgtcgctttccaccagcccgccatggcg
gtggacacgcatatcttccgcctgggcaaccgcaccggcctcgccccgggcaaggatgtg
cgggaggtggaggaggcgctgctgaagcgctgccccccggaatggctgcgcgacgcgcat
cactggctgatcctgcacgggcgctatgtctgcaaggcccggctgccggaatgctggcgc
tgcgcggcacgcgaattctgcaactaccgcgacaaggtgctcgtcccgccgcaacggtcc
aggacagcctga
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