Roseivivax sp. THAF197b: FIV09_16920
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Entry
FIV09_16920 CDS
T06253
Symbol
patB
Name
(GenBank) Cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rot
Roseivivax sp. THAF197b
Pathway
rot00270
Cysteine and methionine metabolism
rot00450
Selenocompound metabolism
rot01100
Metabolic pathways
rot01110
Biosynthesis of secondary metabolites
rot01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rot00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
FIV09_16920 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FIV09_16920 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rot01007
]
FIV09_16920 (patB)
Enzymes [BR:
rot01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
FIV09_16920 (patB)
Amino acid related enzymes [BR:
rot01007
]
Aminotransferase (transaminase)
Class II
FIV09_16920 (patB)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
QFS84523
UniProt:
A0A5P8Z4I7
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Position
complement(3490724..3491896)
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AA seq
390 aa
AA seq
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MNFDEMIDRRGTGCAKWDAMEQAYGVSPEDGIAMWVADMDFRPPRVVQDSLHGLLDHGVY
GYPGPDDAYRDAITWWMQERHGWQVDPSWIFTTHGLVNGTAMCIDTWTEPGDGVVLFTPV
YHAFARVIRSAGREVVECPLVRNHDRYEMDFDAYDAMMTGREKMVMLCSPHNPGGRCWTE
AELKGLAAFAERHDLILVSDEIHADLVMPGHRHIAFDTVDHGIRDRLVMMTAATKTFNIA
GAHIGNVIIPDPALRKAFGQRMAGLGMSPGLFGLRMVTAAYSPQGAEWVNALCEYLDGNR
RILDAAVDEIPGVHSMRLEATYLSWVDFEGTGMSHREVLDRIEGQAKIAVNHGPTFGKGG
EEFLRFNIATQRVRVVEAAERLKAAFSDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttcgacgagatgatcgaccgccgcggcacgggctgtgccaaatgggacgcgatg
gagcaggcgtacggcgtctcccccgaagacggcatcgcgatgtgggtcgcggatatggat
ttccgtccgccgcgcgtggtgcaggacagcctgcacgggctgctcgatcatggcgtctac
ggctatccgggcccggacgatgcctatcgcgacgcgatcacctggtggatgcaagagcgg
catggctggcaggtcgatccctcgtggatcttcacgacccacgggttggtcaacggcacc
gccatgtgcatcgatacctggaccgagcccggcgatggcgtcgtgctcttcacgccggtc
taccacgcttttgcccgcgtcattcggagtgcgggccgggaggtggtggaatgcccgctc
gtgcgcaatcacgaccgctacgagatggatttcgacgcctatgacgcgatgatgaccgga
cgcgagaagatggtcatgctctgctcgccgcacaatcccggcgggcgctgctggaccgag
gcggagctgaaggggctcgccgcctttgcagaacggcacgatctgatcctcgtctcggac
gaaatccacgcggatctggtcatgccggggcatcgccatatcgccttcgacacggtggat
cacgggatccgcgaccggttggtgatgatgacggcggccacaaagaccttcaacatcgcg
ggcgcgcatatcggcaatgtcatcattcccgacccggcgttgcgcaaggccttcgggcaa
cgcatggcgggcttgggcatgtcgccgggcctgttcggcctgcgcatggtcacagccgcc
tattcgccgcaaggggcggaatgggtcaatgcgctctgcgaatatctcgacggcaatcgc
cgcattctggatgccgcggtcgacgagatcccgggcgtgcattccatgcggctcgaggcc
acgtatctcagttgggtcgatttcgaaggcaccggcatgagccatagggaggtgctggac
cggatcgaggggcaggcgaagatcgccgtcaatcatggccccaccttcggcaagggcggc
gaggagttcctgcgcttcaacatcgccacgcagcgcgtccgggtggtcgaggccgcggaa
cgcctgaaagcggccttcagcgatctgcaatag
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