Rahnella sikkimica: BV494_13310
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Entry
BV494_13310 CDS
T05331
Name
(GenBank) pyruvate dehydrogenase (acetyl-transferring), homodimeric type
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
rox
Rahnella sikkimica
Pathway
rox00010
Glycolysis / Gluconeogenesis
rox00020
Citrate cycle (TCA cycle)
rox00620
Pyruvate metabolism
rox00785
Lipoic acid metabolism
rox01100
Metabolic pathways
rox01110
Biosynthesis of secondary metabolites
rox01120
Microbial metabolism in diverse environments
rox01200
Carbon metabolism
rox01210
2-Oxocarboxylic acid metabolism
Module
rox_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
BV494_13310
00020 Citrate cycle (TCA cycle)
BV494_13310
00620 Pyruvate metabolism
BV494_13310
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
BV494_13310
Enzymes [BR:
rox01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
BV494_13310
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Motif
Other DBs
NCBI-ProteinID:
AVF35845
UniProt:
A0A2L1USC9
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Position
complement(2877880..2880543)
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AA seq
887 aa
AA seq
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MSERVNNDVDPIETRDWLQAIESVIREEGVERAQFLIDQVLSEARKGGVSVAAGAASRNY
VNTIAVEDEPEYPGNLELERNIRTAIRWNAIMTVLRASKKDLDLGGHMSSFQSSAAVYEV
CFNHFFRARNEKDGGDLVYFQGHISPGVYARAFLEGRLTEDQMNNFRQEVHGKGLSSYPH
PKLMPEFWQFPTVSMGLGPIGAIYQAKFLKYLDHRGLKDTTAQRVYAFLGDGEMDEPESK
GAITIATREKLDNLCFIINCNLQRLDGPVTGNGKIINELEGIFAGAGWNVIKVIWGNRWD
ELLRKDTSGKLIQLMNETVDGDYQTFKSRDGKYVREHFFGRYPETAALVKDMTDDQIWAL
NRGGHDPKKVFAALNKAQNTKGQPTVILAHTIKGYGMGEAAEGKNIAHQVKKMNMDGVRY
IRDRFSVPVTDENLEKLPYITLEKDSAEYKYLHERRAALKGYLPTRLPNFTQKLEMPKLE
DFSQLLEEQKKEISTTIAFVRALNVMLKNDSIKDRLVPIIADEARTFGMEGLFRQIGIYS
PNGQQYTPQDREQVAYYKEDEKGQILQEGINELGAASSWLAAATSYSTNDLPMIPFYIYY
SMFGFQRIGDLCWAAGDQQARGFLVGGTSGRTTLNGEGLQHEDGHSHIQSLTIPNCISYD
PAYAYEVAVIMHDGLVRMYGDAQENIYYYITTLNENYHMPAMPEGAEEGIRKGIYKLETV
EGSKGKVQLMSSGSILRHVREAAQILSKDYGVGSDVYSVTSFTELARDGQDCERWNMLHP
TETPRVPYVAQVMNDAPVVASTDYMKLFAEQIRNFVPASDFRVLGTDGFGRSDSRENLRH
HFEIDASYVVVAALGELAKRGEIDVKVVAEAITKFGIDADKVNPRLA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacgtgtaaataatgacgtggatccgatcgaaactcgcgactggctacaagcg
atcgaatcggtcatccgtgaagaaggtgttgagcgtgcgcagttcctgatcgaccaggtt
ctgagtgaagcgcgtaagggcggcgtcagcgtcgctgctggtgcagccagccgtaactac
gtcaataccatcgctgttgaagacgaacctgaatatccgggtaacctggagctggaacgc
aacattcgtaccgcaatccgctggaatgcgatcatgaccgttctgcgtgcatccaagaaa
gatctggatctgggcggccatatgtcatccttccagtcttccgctgcggtttacgaagtg
tgcttcaaccacttcttccgtgcgcgcaacgagaaagacggcggcgatctggtgtacttc
cagggccacatctctccgggcgtgtacgcgcgtgctttccttgaaggccgcctgaccgaa
gaccagatgaacaatttccgtcaggaagttcacggtaaaggtctgtcatcttatccgcac
cctaaactgatgcctgaattctggcagttcccgaccgtatcaatgggtctgggtccgatc
ggtgcaatctatcaggctaagttcctgaaatatcttgatcaccgcggtctgaaagacacc
acggcgcagcgcgtttatgcgttcctgggcgacggtgaaatggacgaaccagaatccaaa
ggtgcgatcaccatcgcgacccgtgagaaactggacaacctgtgcttcatcatcaactgt
aacttacagcgtcttgatggcccggtaaccggcaacggcaaaatcatcaacgaactggaa
ggcatctttgcaggcgccggctggaacgtgatcaaagtgatttggggcaaccgttgggac
gaactgctgcgtaaagacaccagcggcaaactgatccagctgatgaacgaaaccgtggac
ggcgactaccagaccttcaagtcccgcgacggtaaatacgttcgtgaacacttcttcggt
cgttacccggaaaccgcagcgctggtcaaagacatgaccgacgaccaaatttgggcactg
aaccgtggtggtcatgatccgaagaaagtcttcgctgcactgaacaaagcacagaacacc
aaaggtcagccgaccgtaatcctggcgcataccatcaaaggttatggcatgggcgaagcg
gctgaaggcaagaacattgcccaccaggtgaagaaaatgaacatggatggcgtgcgctat
atccgtgatcgtttcagcgtgccagttaccgatgaaaatctggaaaaactgccgtacatc
actctggaaaaagactctgcagaatacaaatatctgcacgaacgtcgtgcggcgctgaaa
ggctacctgccaacgcgtctgccaaacttcactcagaagctggaaatgccgaaactggaa
gacttctcacaactgctcgaagagcagaagaaagagatctctactactatcgctttcgtt
cgtgccctgaacgtgatgctgaaaaacgactccatcaaagaccgtctggtgccaatcatc
gccgatgaagcgcgtacattcggtatggaaggtctgttccgtcagattggtatttacagc
ccgaacggccagcagtacaccccgcaggaccgtgagcaggttgcttactataaagaagac
gagaaaggtcagatcctgcaggaaggtatcaacgaactgggtgccgcatcttcatggctg
gccgcagcgacctcttacagcaccaacgatctgccaatgatcccgttctacatctactac
tccatgtttggtttccagcgtatcggcgacctgtgctgggcagcgggtgaccaacaggcg
cgtggcttcctggtcggtggtacttcgggtcgtacaacgcttaacggcgaaggtttgcag
cacgaagatggtcacagccacattcagtcgctgactatccctaactgtatttcttacgat
ccggcgtatgcctacgaagtggcagtcatcatgcatgacggtctggtgcgtatgtacggc
gacgcgcaggaaaacatttattactacatcactacgctgaacgaaaactaccacatgcca
gccatgccagaaggcgcggaagaaggcatccgtaaaggtatctacaagttagaaaccgtg
gaaggtagcaaaggtaaagtgcagctgatgagctccggttctattctgcgtcacgtgcgt
gaagccgctcagatcctgtccaaagactacggcgtaggctctgacgtttacagcgtaacc
tcgttcaccgaactggcccgcgatggtcaggattgtgagcgctggaatatgctgcacccg
acagaaactccacgcgtaccttatgtggctcaggtgatgaatgatgcgccggtcgtggca
tcgactgactacatgaaattgttcgccgagcaaatccgtaacttcgttccagccagcgat
ttccgtgttctgggcaccgacggtttcggccgctctgacagccgcgaaaacctgcgtcac
cacttcgaaattgatgcttcctacgttgtggttgctgcgctgggcgaactggctaaacgt
ggcgagatcgatgtgaaagtagtggctgaagccattaccaaattcggcatcgatgctgac
aaagttaacccgcgtctggcataa
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