Rahnella sikkimica: BV494_13465
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Entry
BV494_13465 CDS
T05331
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rox
Rahnella sikkimica
Pathway
rox00300
Lysine biosynthesis
rox00550
Peptidoglycan biosynthesis
rox01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BV494_13465
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
BV494_13465
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rox01011
]
BV494_13465
Enzymes [BR:
rox01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
BV494_13465
Peptidoglycan biosynthesis and degradation proteins [BR:
rox01011
]
Precursor biosynthesis
Amino acid ligase
BV494_13465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AVF35875
UniProt:
A0A2L1USF8
LinkDB
All DBs
Position
complement(2912146..2913633)
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AA seq
495 aa
AA seq
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MADRNLRDILAPWVSEAPAVALKDMILDSRIAAAGDLFVAVSGHTSDGRRFIPQAIAQGV
AAVVAEAKGEQEHGTVSQMHGVPVIYLEDLNVLLSELAGRFYQQPGKSLRLVGVTGTNGK
TTTTQLLAQWSQLLGETSAVMGTVGNGLLDNVVPAENTTGSAVQVQHILADLVKQGATFA
AMEVSSHGLVQHRVAALPFAAAAFTNLSRDHLDYHGDMQSYEDAKWQLFSSHPVGQKIIN
ADDEVGARWLAKTPDSVAVSMEDKIPAGWKGRWLVARSVNYHDNGATVNIDSSWGEGKLE
SRLMGAFNVSNLLVGLATLLSLDYPLPQLLATASQLQPVCGRMEVFNAPGKPTAVVDYAH
TPDALEKALAAARLHCKGQLWCVFGCGGDRDKGKRPLMGGIAEQFADRVIVTDDNPRSEE
PRAIVADILAGLLDAGRAQEIHGRAEAVTSAIMQAKEDDVVLIAGKGHEDYQLVGNQRLD
YSDRVTVARLLGVIA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtaatttgcgcgacatcttagcgccctgggtgagtgaagccccagcggta
gcgctaaaagacatgatcttagacagccgcatcgcggctgccggcgatctgtttgtcgcg
gtctcaggccataccagtgatgggcgtcgttttattccccaggccattgcccagggcgtc
gctgccgtcgtggccgaagcaaaaggtgaacaagagcacggtacggttagccagatgcat
ggtgtgccggtgatttatcttgaggatctcaacgtcttgctttctgaactggcaggacgt
ttttatcagcagccaggcaaatcattgcgtctggttggcgtgaccggcaccaacggtaaa
accaccaccacgcaactgctggcgcagtggagccagttgttgggcgaaaccagcgcggtg
atggggacggtgggaaatggtctgctggataacgtggttccggcggaaaacaccaccggt
tcggccgttcaggttcagcatattctggctgatttagtgaaacagggtgccaccttcgcc
gcgatggaagtctcttcccacgggctggtgcagcatcgtgtggccgcgctgccgttcgct
gccgccgcgtttaccaacctgagccgcgatcatctggattaccacggtgacatgcagagc
tacgaagacgccaaatggcagctcttctcctcgcatccggtcggtcaaaaaattatcaat
gctgacgatgaagtcggggcgcgctggctggcgaaaacccctgattctgttgcggtcagc
atggaagacaaaatcccggcgggctggaaaggccgctggctggttgcccgtagcgtgaat
tatcacgacaacggcgcgacggtgaatatcgattcaagctggggcgaaggcaagctggag
agccgcctgatgggcgcgtttaacgtcagcaatctgctggtcggactggcgacgctgctt
tcccttgattacccgctgccacaattgctggcgacggcttctcagttacagccggtttgc
gggcgcatggaagtcttcaacgcaccgggtaaaccgaccgctgttgtcgattacgcacat
acaccggatgcgttagaaaaagcgctggcggctgcccgtctgcactgcaaagggcagctt
tggtgcgtgtttggctgcggtggcgatcgcgataaaggcaaacgtcctctgatgggtggc
atcgccgaacagttcgccgatcgcgttatcgtgaccgatgacaacccgcgcagcgaagaa
cctcgcgccatcgtggcagatattctcgccggattgctggatgctggccgtgcacaggaa
attcacggtcgtgcggaagcggtgaccagcgccatcatgcaggcgaaggaagatgacgtc
gtgctgattgccggcaaaggccacgaagattatcaactggtagggaatcagcgccttgat
tactccgaccgcgtgactgtcgcacgtttgctgggggtgatcgcatga
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