Rahnella sikkimica: BV494_20965
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Entry
BV494_20965 CDS
T05331
Name
(GenBank) efflux transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
rox
Rahnella sikkimica
Pathway
rox01501
beta-Lactam resistance
rox01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rox00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
BV494_20965
01503 Cationic antimicrobial peptide (CAMP) resistance
BV494_20965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rox03036
]
BV494_20965
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rox02000
]
BV494_20965
01504 Antimicrobial resistance genes [BR:
rox01504
]
BV494_20965
Chromosome and associated proteins [BR:
rox03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
BV494_20965
Transporters [BR:
rox02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
BV494_20965
Antimicrobial resistance genes [BR:
rox01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
BV494_20965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
DUF1344
Motif
Other DBs
NCBI-ProteinID:
AVF37217
UniProt:
A0A2L1UWD1
LinkDB
All DBs
Position
complement(4536194..4537327)
Genome browser
AA seq
377 aa
AA seq
DB search
MRLKFLSVSTVVLLSACDGSAGSASPAAQVPAVNVVTLHSQPVTLTTRLPGRTTAVRSAE
VRPQVSGVILKRLFVEGSEVKAGQQLYQIDPSTYQATFDRAMATWKSADATARRYKPLVE
AQAVSHQQYDDAVAAEREAAADVETARVNLQYTKVYAPISGHIGRSLSTEGALVTSGQTT
SMTTIDQLNPIYVDVNESSLDLLKLRRALASGKLQSAGENAAQANLTLEDGSKYALPGKL
EFSEVTVSQSTGSVTLRASFPNPHDELLPGMFVHAELQQGVDDNGILVPQEAIMHDVKGA
PYVYVVKADNTVEQRSITTGQMMNGFWLVNQGLRDGDKVITDGLQNVRAGAKVNATERPA
SAPAEQANLAITDPSAQ
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgaagttcctttctgtcagtacagttgtgctgctttccgcatgtgatggttcc
gccggttctgcctctccggcggcacaagtgcctgcggtcaatgtcgtcactctgcacagc
cagcccgtcacgttaaccacccgtctgcccggccgcacaactgccgtgcgcagcgccgaa
gtacgtccgcaggtcagcggcgttatcctgaaacgtctgtttgtggaagggagcgaagtg
aaagccggtcagcagctttatcagattgatccgtcaacctaccaggcgacctttgaccgt
gcgatggccacctggaaaagcgctgacgccaccgcgcgccgctataaaccgctggtcgag
gcgcaggccgtcagccatcagcaatatgacgatgccgttgcggccgagcgcgaagccgcc
gccgatgtcgaaaccgcccgcgtgaatctgcaatacaccaaagtgtacgcgccgatttcc
ggtcacattggccgttcgttgtccaccgaaggggcgctggtcaccagcggtcagaccacg
tcgatgaccaccatcgaccagctgaatcctatctacgttgacgtgaatgagtcctcactc
gatttgctcaaactgcgacgtgcgctggcttccggcaaattgcagtccgccggtgaaaac
gccgcgcaggccaacctgacgctggaagatggcagcaaatacgccctgccgggcaaactg
gaattctcagaagtcaccgtgtcgcaaagcaccggttccgtgaccctgcgtgcttcattc
ccgaatccgcacgacgaattattgccgggcatgtttgttcacgccgagctgcaacagggc
gtggatgacaacgggatcctggtgccgcaggaagcgatcatgcatgacgtgaaaggcgcg
ccatacgtttacgtggtgaaagccgataacaccgtcgaacagcgttccatcaccaccggt
cagatgatgaatggcttctggctggtgaatcagggtctgcgcgatggcgacaaagtgatc
accgatggattacaaaacgtcagagcaggggcaaaagttaacgccaccgagcgcccggcc
agtgcgcctgccgaacaggctaatctcgcgattaccgatccttccgcgcaataa
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