Rhizobium oryzihabitans: G3A56_12595
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Entry
G3A56_12595 CDS
T06770
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
roy
Rhizobium oryzihabitans
Pathway
roy00020
Citrate cycle (TCA cycle)
roy00785
Lipoic acid metabolism
roy01100
Metabolic pathways
roy01110
Biosynthesis of secondary metabolites
roy01120
Microbial metabolism in diverse environments
roy01200
Carbon metabolism
roy01210
2-Oxocarboxylic acid metabolism
Module
roy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
roy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
roy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
G3A56_12595
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
G3A56_12595
Enzymes [BR:
roy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
G3A56_12595
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Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
QIB38732
UniProt:
A0A7L5BIR6
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All DBs
Position
M15-11:2456274..2459270
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AA seq
998 aa
AA seq
DB search
MARQEANEQFQITSFLDGANAAYIEQLYARYEEDPSSVSPEWQSFFKALSDNPEDVKKAA
KGASWKRANWPIPANGDLVSALDGNWATVEKAIEKKVQAKAEAKSADTGKAVSPAEVLQA
TRDSVRAIMMIRAYRMRGHLHAKLDPLGIASAVEDYNELSPKSYGFEESDYDRKIFIDNV
LGLEYATVREMVDILERTYCSTLGVEFMHMSNPEEKGWIQERIEGPDKGVDFTPEGKKAI
LSKLVEAEGYEQFLDVRFKGTKRFGLDGGESLIPALEQIIKRGGQDGLEEVVLGMAHRGR
LNVLTNVMGKPHRAVFHEFKGGSFKPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQLAKTWDGDIIPLSERAKVLPLLLHGDAAFAGQGVVAEILG
LSGLRGHRVAGTMHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVTY
AAKVATEYRMKFHKPVVIDMFCYRRFGHNEGDEPAFTQPKMYKVIRGHKTVARIYADRLI
AEGLITEGDFEKIKADWRAHLEQEFEAGQSYKPNKADWLDGQWSGLRAADNADEQRRGKT
GVPMKQLKEIGKKLSTIPEGFSAHRTIQRFMENRSQMIETGEGIDWAMAEALAFGSLAVD
GHKIRLSGQDCERGTFSQRHSVLYDQETEERYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERWLQMCAEDNMQVANCTTPANYFHILRRQMKRDFRKPLILMTPKSLLRHKRA
TSSLAELAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVMCTGKVYYDLLEEREKRGI
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQKVRYTGRPAAASPATGLMSKHLAQLAAFLEDALGE
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcaagaagcgaacgagcagtttcagatcacgtcgtttctggacggcgcgaat
gcagcctatatcgagcagctctatgcccggtacgaagaggatccctcttccgtgtcgccg
gagtggcagagcttcttcaaggcgttgtccgacaatccggaagacgtgaagaaggcagcc
aagggcgcctcctggaagcgcgccaactggccgatcccggcaaatggcgacctggtatcc
gcgctggacggcaactgggccacggtcgagaaggccatcgagaagaaggttcaggcgaaa
gccgaggcgaagagcgccgataccggcaaggctgtcagcccggccgaagtgcttcaggcg
acccgtgatagcgttcgcgccatcatgatgatccgcgcctaccgcatgcgcggccacctg
catgccaagctcgatccgctcggcattgccagcgccgttgaagattacaacgagctttcg
ccgaagtcctacggcttcgaggaaagcgattacgaccgcaagattttcatcgataacgtt
ctcggtctcgaatatgcgaccgtgcgcgagatggtcgatattcttgagcgcacctattgc
tcgacgctcggcgtcgaattcatgcatatgtccaacccggaagaaaagggctggatccag
gaacgcatcgaaggcccggacaagggcgtggacttcacgccggagggcaagaaggccatt
ctgtccaaactggtcgaagccgaaggttacgagcagttcctcgacgtgcgtttcaagggc
accaagcgtttcggcctcgatggcggcgaatcgctgatcccggcacttgagcagatcatc
aagcgcggcggccaggacggtctggaagaagtcgtgctcggcatggcccaccgcggccgc
cttaacgttctgaccaacgtcatgggcaagccgcaccgcgccgtgttccacgagttcaag
ggcggttcgttcaagcctgacgacgtcgaaggttccggcgacgtgaagtaccatctaggt
gcctcctccgaccgcgaattcgacggcaacaaggttcacctgtcgctgacggccaacccg
tcgcaccttgaaatcgtcaaccctgtcgtcatgggcaaggcccgcgccaagcaggaccag
ctcgccaagacatgggacggcgatatcattccgctgtcggaacgcgccaaggtgctgccg
ctcctgttgcacggcgatgccgcttttgcgggtcagggcgtggttgctgaaattctcggc
ctttccggcctgcgcggtcaccgcgttgccggtaccatgcacttcatcatcaacaaccag
atcggtttcacgacgaacccggccttctcgcgctcgtcgccctatccgtccgacgttgcc
aagatgatcgaggcgccgatcttccacgtcaacggcgacgatccggaagcggtgacctat
gcggcgaaggtcgcgaccgaataccgcatgaagttccacaagcctgtcgtcatcgacatg
ttctgttatcgccgcttcggccataacgaaggcgacgagcccgcgttcacgcagccgaag
atgtacaaggtcatccgtggccacaagaccgtcgcacgcatctatgccgaccgtctgatt
gcggaaggcctgatcactgaaggcgatttcgagaagatcaaggccgactggcgcgcgcat
ctcgagcaggagttcgaggcaggccagtcctacaagccgaacaaggccgactggctggac
ggtcagtggtcgggccttcgcgccgccgacaatgccgatgagcagcgtcgtggcaagacc
ggcgtgccgatgaagcagctgaaggaaatcggcaagaagctgtcaaccattccggaaggt
ttcagcgcacaccgtacgatccagcgcttcatggaaaaccgctcgcagatgatcgagacg
ggtgagggcatcgactgggcaatggcggaagcgcttgctttcggttcgctcgccgtcgac
ggtcacaagatccgtctctccggtcaggattgcgaacgcggcaccttctcgcagcgccac
tcggttctctacgatcaggaaaccgaagagcgttacattccgcttgccaatctttcaccg
acgcaggcccgttacgaagttatcaactcgatgctttcggaagaagcggttctcggtttc
gaatatggctattcgctggcccgtccgaatgcgctgacgctctgggaagcccagttcggc
gacttcgccaacggcgcgcaggtggtgttcgaccagttcatctcttcgggtgaacgcaag
tggctgcgcatgtccggtctcgtctgccttctgccgcatggttatgaaggtcagggtccg
gagcactcgtccgcccgtctggagcgctggctgcagatgtgcgccgaagacaacatgcag
gttgccaactgcacgacgccggccaactacttccacatcctgcgccgccagatgaagcgt
gacttccgcaagccgctgatcctcatgacgccgaagtcgctgctgcgtcacaagcgcgcc
acttcgtcgctggcggagcttgcgggtgagtcctccttccaccgtctcctgtgggacgat
gctgaagtcatcaaggacggccccatcaagctgcagaaggattcgaagatccgtcgcgtc
gtcatgtgcacgggcaaggtctattacgatctgctcgaggagcgtgaaaagcgcggtatc
gacgacatctacctgctgcgcgtcgaacagctctatccgttcccggccaaggctctcatc
aacgagctttcccgtttccgcaatgcggagatggtctggtgccaggaagagccgaagaac
atgggtgcgtggtcgttcatcgatccttaccttgaatgggttctggcgcatatcgacgcc
aagtaccagaaggtccgttacacgggccgtccggctgccgcctctccggcgaccggcctg
atgtccaagcatctggcgcagcttgctgcgttcctggaagacgcgctgggagagtga
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