Rhodococcus oxybenzonivorans: CBI38_11515
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Entry
CBI38_11515 CDS
T08279
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
roz
Rhodococcus oxybenzonivorans
Pathway
roz00300
Lysine biosynthesis
roz00550
Peptidoglycan biosynthesis
roz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
roz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CBI38_11515
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBI38_11515
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
roz01011
]
CBI38_11515
Enzymes [BR:
roz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
CBI38_11515
Peptidoglycan biosynthesis and degradation proteins [BR:
roz01011
]
Precursor biosynthesis
Amino acid ligase
CBI38_11515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
AWK72115
UniProt:
A0A2S2BU01
LinkDB
All DBs
Position
2420683..2422173
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AA seq
496 aa
AA seq
DB search
MSIDCPSRPPTPLREVLRRLGGAAVLFGTGEEVVTGISQDSRLVRPGDLYAALPGQRWHG
AAFAAEAVSHGAVAMLSDHPSELLPTIVVDDPRCAVGPLASALYGNPSGALDVYGVTGTN
GKTSTAYLLEAGLRGAGIAAGRITGITVRGCCGSRDAVRTTPEASELQQTLAAFKDQGVS
AVAMEVSSHGLALHRVDGTSFGVAVFTNLARDHLDFHKDMDSYFAAKARLFSAERCATAA
IGIDDEFGRRLAATVSVPRLTFSSKSVAADIYGDDVHADEGGTSFRLHGPSGTTTIRLRL
LGAHQVDNALAAVTALTVRGVDLDGAIAGIEGLDTVPGRLEAIDAGQPFLAFVDYMHNTG
GQRRLFPYLRSLTRGKVIVVIGATGNRDPGKRAPLGTTAAELADIVVVTDESPFSEDAEV
LRDDVAGAARRVKTAEVLVVPERGEAIATAVTLAAPGDVVVVAGRGSDAVQDFGRVRRPF
DDRVALYDAVLRSARA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcgactgcccgtcccgtccgcccacacctctgcgcgaggtgctgcgccgcctc
ggcggggcggcagtgctcttcgggaccggggaggaagtcgtgacgggtatcagtcaggac
tcgcgtctcgtccgtccgggcgacctctatgcggcgctgcccggccagcgctggcacggc
gccgcgttcgccgccgaagccgtctcgcatggtgcggtcgcgatgctgagtgaccacccg
tcggaactcctgccgaccatcgtcgtggacgatccgcggtgtgctgtagggccgctcgct
tccgcactctacggaaatccctccggcgcactcgatgtctacggcgtgacgggaacgaac
ggaaagaccagcaccgcatatctactcgaggccggtttgcgcggcgccggaattgccgcc
ggacggattaccggcatcacggtgcggggatgctgcggttcgcgggacgctgtccggacc
actcccgaggcatccgaactccagcagactctcgccgctttcaaagaccagggtgtctcc
gcggtggcgatggaggtgtccagccacgggctcgcgctgcatcgcgtcgacggaacgtcg
ttcggtgtagccgtattcaccaatttggcacgggaccatctcgatttccacaaagatatg
gattcatattttgccgcgaaggcgaggttgttcagcgccgagcgttgtgcgactgcggca
atcggcatagacgacgaattcggtcgccgccttgccgccactgtgtccgtgccccggctg
accttttcctcgaagtctgtggcggcagatatttacggcgacgacgtgcacgccgacgag
ggtggaacgtcgttcaggttgcacggcccgtcggggacgaccacgattcgactgcggctc
ctgggcgcccatcaggtggacaacgcacttgccgctgtcacggccctgactgtgcgcggg
gtcgacctcgacggcgcgatcgccggaatcgagggcctcgacaccgtgccgggtcgtctc
gaagcgatcgacgcgggccagcccttcctggccttcgtcgactacatgcacaacacggga
ggtcagcggcggttgttcccgtatcttcgctcgctgacccggggcaaggtcatcgtcgtc
atcggggcgaccggcaatcgtgatccgggtaagcgtgccccgctggggacgacggcggcc
gagctcgccgacatcgtcgtcgtcacagacgaaagcccattctcggaagatgccgaggtg
ctgcgggacgacgtcgcaggagcggcgcggagggtgaagaccgctgaggtactcgtcgtc
cccgaacgcggcgaggccatcgcgaccgcggtcacgctggccgcacccggtgacgtcgtc
gtcgtagcgggtcgcggttccgacgccgtgcaggatttcggccgggtccggcgacctttc
gatgatcgcgtcgccctttacgacgctgtactccggtccgcgcgggcgtga
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