Rhodococcus oxybenzonivorans: CBI38_18425 Help Entry CBI38_18425       CDS       T08279                                  Name (GenBank) DNA ligase (NAD(+)) LigA   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism roz  Rhodococcus oxybenzonivorans Pathway roz03030   DNA replication roz03410   Base excision repair roz03420   Nucleotide excision repair roz03430   Mismatch repair Brite KEGG Orthology (KO) [BR:roz00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     CBI38_18425    03410 Base excision repair     CBI38_18425    03420 Nucleotide excision repair     CBI38_18425    03430 Mismatch repair     CBI38_18425  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:roz03032]     CBI38_18425    03400 DNA repair and recombination proteins [BR:roz03400]     CBI38_18425 Enzymes [BR:roz01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      CBI38_18425 DNA replication proteins [BR:roz03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      CBI38_18425 DNA repair and recombination proteins [BR:roz03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      CBI38_18425    NER (nucleotide excision repair)     GGR (global genome repair) factors      CBI38_18425    MMR (mismatch excision repair)     DNA ligase      CBI38_18425   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       CBI38_18425 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT DNA_ligase_ZBD HHH_5 PTCB-BRCT HHH Motif Other DBs NCBI-ProteinID:  AWK73244 UniProt:  A0A2S2BXG2 LinkDB All DBs Position complement(3935170..3937260) Genome browser AA seq 696 aa AA seqDB search MTESTEAPTPAPGDVRERWNELAEEVRQHQFRYYVRDAPVISDGEFDALLGQLNDLENQY PDLRTPDSPTQLVGGGFATDFTSVDHLERMLSLDNVFATDELRTWISRVEQEAGADLPYL CEVKIDGVALNLVYENGRLVRAATRGDGRTGEDVTLNARTIDDIPERLTGTDEYPVPALL EVRGEVFFRLEDFAALNAALVDEGKAPFANPRNSAAGSLRQKNPAVTARRRLGMICHGFG RIEGFEPVSQYDAYTALAAWGLPVSSHTSRVVGADAVVAKVQYWGEHRHDVEHEIDGLVV KVDEMLLQRRLGSTSRAPRWAIAYKYPPEEATTKLLDIRVNVGRTGRVTPFAYMEPVTVA GSTVSLATLHNGSEVKRKGVLIGDTVVIRKAGDVIPEVLGPVVDVRTGDEHEFVMPTHCP ECGTLLAPAKEGDADIRCPNQRYCPAQLRERVFHVAGRGAFDIEVLGYEAATGLLEAGAI EDEGDLFSITEDDLLKTSIFRTKAGALSANGRRLLDNLDSAKDKPLWRVLVALSIRHVGP TAARALAGEFGSLDRIRQSSVEELAAVDGVGGTIAAAVAEWFGVDWHLQIVEKWAAAGVR MEDERDESIPRNLEGLSIVVTGSLETFSRDQAKEAILVRGGKAAGSVSKKTAYVVVGESP GSKHDKAVELGVAVLDEDGFRRLLEGGPEAVADSEM NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt gtgactgaatcgaccgaagccccgacaccggcccccggcgacgtacgggagcggtggaac gaactggccgaggaagtgcggcagcatcagttccgctactacgtccgcgacgcgcccgtc atttccgacggtgagttcgatgcgctgctcggacagttgaacgacctcgagaaccaatac ccggacctgcgcacccccgactcgccgacccagctcgtcggcggcggcttcgcgacggat ttcacctccgtcgaccacctcgagcgcatgctcagtctcgacaacgtgttcgccacagac gagttgcgcacctggatcagccgggtggaacaggaggcgggcgccgatctgccctacctc tgcgaggtgaagatcgacggcgtcgcactcaacctcgtgtacgagaacggccgactcgtg cgcgcagccactcgcggtgacgggcgcacgggcgaggacgtcacactcaacgcacgcacg atcgacgacattccggaaagactcaccggcacagacgaatacccggttcccgccttgctc gaggtgcgcggcgaggtgttcttccggctcgaggatttcgcggctctcaacgccgcgctc gtcgacgaaggcaaggcgcccttcgcgaatccccgcaactccgcagccggctcgctgcgg cagaagaatcccgcggtcactgcccggcgccgtctcggaatgatctgtcacggtttcggc cggatcgaagggttcgagcccgtctcgcagtacgacgcctacacggcgctggccgcgtgg ggtctgcccgtctcctcacacacctcccgtgtcgtgggcgccgacgcggtggtggcgaag gtccagtactggggtgaacaccggcacgacgtcgagcacgaaatcgacggactggtggtg aaggtcgacgagatgttgctgcaacgccggctcggttccacctcgcgagccccgcggtgg gcgatcgcgtacaaatacccgcccgaggaagccaccaccaagctcctcgacatccgggtc aatgtggggcggacgggacgggttacacctttcgcctacatggaaccggtcaccgtcgcc ggttccaccgtgtctctcgccaccctgcacaacggctccgaggtcaagcgcaagggtgtc ctgatcggtgacaccgtggtaatccgcaaggctggtgacgtcatcccagaggttctgggc cccgtcgtcgacgtgcgtactggcgacgagcacgagttcgtcatgccgacgcactgcccc gagtgcggcaccctcctggccccggccaaggagggggatgccgacatccgctgccccaat cagcgctactgtcccgcgcagctccgcgagcgggtcttccacgtcgcgggccgcggcgcg ttcgacatcgaggtgctcggttacgaggccgcgacggggctgctcgaggccggggcgatc gaggacgagggtgacctgttctcgatcacggaggacgatctcctgaagacgtcgattttc cgaaccaaggcgggggctctctccgccaacggccggcggctcctcgacaacctcgactcc gcgaaggacaaaccgctgtggcgggtgctcgtggcgttgtcgattcgtcatgtgggaccc acggctgcccgtgcgcttgccggcgagttcggttcgctcgatcggatccgccagagttct gtcgaggagttggcggcagtggacggcgtgggcggcaccatcgccgccgcggtcgcggaa tggttcggagtcgactggcatctgcagatcgtcgagaagtgggcggcggccggggtgcgc atggaagatgaacgtgacgaatcgatcccgcgcaacctcgaaggcttgtcgatcgtggtg accggatcactcgagacgttctcgcgtgatcaggccaaggaagccatcctcgtccgaggc ggcaaggccgcgggttcggtgtcgaagaagacggcctatgtggtggtcggggaatcaccg ggctcgaagcatgacaaggccgtcgaactcggtgttgctgttctcgacgaggacggattc cggcgactgctcgaaggtgggccggaggctgtggccgattcggagatgtga

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