Rhodopseudomonas palustris CGA009: TX73_009020
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Entry
TX73_009020 CDS
T00153
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
rpa
Rhodopseudomonas palustris CGA009
Pathway
rpa01501
beta-Lactam resistance
rpa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rpa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TX73_009020
01503 Cationic antimicrobial peptide (CAMP) resistance
TX73_009020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpa02000
]
TX73_009020
01504 Antimicrobial resistance genes [BR:
rpa01504
]
TX73_009020
Transporters [BR:
rpa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TX73_009020
Antimicrobial resistance genes [BR:
rpa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
TX73_009020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
Motif
Other DBs
NCBI-ProteinID:
WCL91897
UniProt:
Q6N8Z7
LinkDB
All DBs
Position
1961117..1964311
Genome browser
AA seq
1064 aa
AA seq
DB search
MIALVCIALSRPYTFVVLALLLLIVGPLAALRTPTDIFPEIRIPVIGVVWQYTGLPPDQM
AGRITTPFQRALTTTVNDIEHIVANSYGGFGIVKIFFQPNVDIRTANAQVTAISQTLLKQ
MPPGATPPLILNYSASTVPILQLALSGEGMTEQSLADLAINQLRTPLVTVPGAAIPWPFG
GKQRQIQIDLDPSALQARGLSGQDVANALAAQNLITPVGTQKIGEFEYIIQLNNSPLKIE
ELGNLPIKAVGGAMVYIRDVASVRDGNPPQTNIVHVDGNRSVLMMVLKAGAVSTLDIIAG
IKQKIIDVKGAMPESLKIALIGDQSVFVRGAITGVAVEGVIAALLTSVMILLFLGSWRST
IIIAVSIPLSVLGAIICLSAIGETLNIMTLGGLALAVGILVDDATVTIENINWHLEQGKE
VEPAILDGANQIVTPAFVSLLCICIVFVPMFFLQGVARYLFVPMAEAVMFAMAWSFLLSR
TLVPTMAKYLLKPHVHHDSLSGRKPSRNPLVRFQQAFEGVFARFRHGYGDLLTLAMGHRR
AFVAGFLGVVALSFALVPYLGRNFFPSVDAGQILMHVRTQVGTRIEETANQLAEVQKAIR
KIIPPDQIETLTDNIGMPISGINLTYNNTGVIGTQDADIQIKLKGEHRPTEQYVKILREQ
LPRQFPGMTFAFLPADIVSQILNFGAPAPIDLQIRGANLPANFDYAGKLLAKIKRIPGVA
DARIQQSPNNPTFNIDVDRTRAQYVGLTERDVTNSLVVNLAGSSQVAPTYYLNPENGVSY
SIVMQTPQYHVDSLSKLETIPVSASGAAAAGAPILGGLAEIKRSAGNAVVSQYDIQSIVQ
IFATTQGRDLGAVAADIRKVIDETKAEVPKGSSVVLLGQVETMNSAFAGLLFGLLGAIVL
IYLLIVVNFQSWADPFVIITALPAALAGIVWMLFATGTTLSVPALTGAIMCMGVATANSV
LVISFARERYAVLGDPVQAALESGFVRFRPVLMTALAMIIGMAPMALGLGEGGEQNAPLG
RAVIGGLLFATFATLMFVPVVFSMVHKKQPASNAEPAPEISHAH
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgctggtctgcatcgcattaagccggccgtacacgttcgtggtgttggcgctg
ctgctgctgatcgtcggcccgctggcggcgctccgtaccccgaccgacatcttccctgaa
attcgtatcccggtgatcggtgtcgtctggcagtacaccggcctgccgccggatcagatg
gcgggacgtatcaccacgccattccagcgtgcactcaccaccacggtgaacgatatcgag
cacatcgtggcgaactcttatggcgggttcggcatcgtcaagatcttcttccagcccaac
gtcgacatccgcaccgcgaatgcgcaggtcaccgcgatctcgcagacgctgctcaagcag
atgccgcccggcgcgacgccaccgctgatcctgaactactccgcctccaccgtgccgatt
ctacagttggcgctgtcgggcgaggggatgacggaacagagcctcgccgacctcgccatc
aatcagcttcgtactccgctggtgacggtgcccggcgcggcgatcccgtggccgttcggc
ggtaagcagcgccagatccagatcgatctcgatcccagcgcgctgcaggcgcgcggcctg
tccggccaggacgtcgccaacgcgctggccgcgcagaacctgatcaccccggtcggcacc
cagaagatcggcgagttcgaatacatcatccagctcaacaactcgccactgaagatcgag
gagctcggcaacctgccgatcaaggcggtcggcggcgcgatggtctatatccgcgacgtc
gcctcggttcgtgacggcaatccgccgcagaccaacatcgtgcatgtcgacggcaaccgt
tcggtgctgatgatggtgttgaaggccggcgcggtgtcgacgctcgatatcattgccggc
atcaagcagaagatcatcgacgtcaagggtgccatgcccgagtcgttgaagatcgcgctg
atcggcgatcagtcggtgttcgtccgcggcgccatcaccggagtggccgtcgaaggggtg
atcgcggccctgctgaccagcgtgatgatcctgctgttcctgggcagctggcgatcgacc
atcatcatcgcggtatcgatcccgctgtcggtgctcggcgctatcatctgcctgtcggcg
atcggcgagactctgaatatcatgacgctcggcggcctcgcgctggcggtcggcatcctg
gtcgacgacgccacggtgacgatcgagaacatcaattggcacctggaacagggcaaggag
gtcgagcccgcgattctcgacggcgccaaccagatcgtgacgccggccttcgtctcgctg
ctatgcatctgcatcgtgttcgtgccgatgttcttcctgcagggcgtcgcgcgctatctt
tttgtgccgatggccgaagcggtgatgtttgcgatggcctggtcgttcctgctgtcgcgc
acgctggtgccgacgatggcgaagtatctgctgaagccgcacgtccatcacgacagcctt
tcggggcggaagccgtcgcgcaatccgctggtgcgctttcagcaggcgttcgaaggcgtg
ttcgcccggttccgtcacggttatggcgatctgctgacactcgcgatggggcatcgccgg
gcgttcgtcgccggcttcctcggcgtggtcgcgctgtcgttcgcgctggtgccgtatctc
ggccgcaacttcttcccgtcggtcgatgcggggcagatcctgatgcatgtccgcacccag
gtcggcacccggatcgaggaaaccgccaaccagctcgccgaggtgcaaaaggcgatccgc
aagatcattccgccggaccagatcgagaccctgaccgacaacatcggcatgccgatctcg
ggcatcaatctgacctataacaacaccggcgtgatcggcacccaggatgccgacatccag
atcaagctgaagggcgagcacaggccgaccgaacagtatgtgaagatcctgcgcgagcag
ttgccccggcagttccccgggatgaccttcgcgtttctgccggccgatattgtcagccag
atcctcaatttcggcgcgccggcgccgatcgacctgcagatccgcggcgccaatttgccg
gcgaatttcgattacgccggcaagctgctggccaagatcaagcgcatcccgggcgtcgcc
gatgcccgcattcagcagtcgcccaacaacccgaccttcaacatcgatgtcgaccgcacc
cgcgcccaatatgtcggcctgaccgagcgtgacgttaccaacagcctcgtcgtcaacctt
gccggctcgtcccaggtggcgccgacctattatctcaatcctgagaacggcgtgtcgtat
tcgatcgtgatgcagacgccgcaatatcacgtcgactcgctgagcaagctcgagaccatt
ccggtgtcggcctcaggtgcggccgcggcaggcgcgccgatcctcggtggccttgccgag
atcaagcgctccgccggcaatgccgtggtgtcgcaatacgacatccagtcgatcgtgcag
atcttcgccaccacgcaggggcgtgacctcggcgcggtggcagccgatatccgcaaggtg
atcgacgagaccaaggccgaggtgccgaagggctcgtcggtggtgctactcggccaggtt
gagaccatgaacagcgcgtttgctgggttgctgttcggcctgctcggcgcgatcgtgctg
atctatctgctgatcgtcgtcaacttccagtcctgggccgatccgttcgtgatcatcacg
gcgctgccggctgcactcgccggcatcgtctggatgctgttcgcgaccggcacgacgctg
tccgtgccggcgctcaccggcgcgatcatgtgcatgggcgtcgccaccgctaacagcgtg
ctggtgatctcgtttgcgcgcgagcgctatgcggtgctcggcgatccggtgcaggccgcg
ctggagtccggcttcgtccggttccgtccggtgctgatgacggcgctggcgatgatcatc
ggcatggcgccaatggcgctgggtctgggcgagggcggcgagcagaacgcgccgctcggc
cgcgccgtgatcggcgggttgctgtttgcgacattcgcgacgctgatgttcgtgccggtg
gtgttcagcatggttcacaagaaacagccggcatccaatgccgagcctgctccggagatc
tcgcatgcccactga
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