Ruminiclostridium papyrosolvens: P0092_12855
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Entry
P0092_12855 CDS
T08965
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rpay
Ruminiclostridium papyrosolvens
Pathway
rpay03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P0092_12855 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpay03400
]
P0092_12855 (nth)
Enzymes [BR:
rpay01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
P0092_12855 (nth)
DNA repair and recombination proteins [BR:
rpay03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P0092_12855 (nth)
Prokaryotic type
P0092_12855 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
HHH_5
Ogg-HhH
HHH_2
RecR_HhH
EndIII_4Fe-2S
Na_Ca_ex_C
5_3_exonuc
Mre11_acc_DNA_cap
Motif
Other DBs
NCBI-ProteinID:
WES32646
LinkDB
All DBs
Position
complement(2883207..2883839)
Genome browser
AA seq
210 aa
AA seq
DB search
MTKKEKVLQMIEVLDKLYPDAECSLMYENPLQLLISTQLAAQCTDARVNIVAKNLYKKYP
SVEAFANANIRELEEDIKSTGFYRNKAKNIIGCCKIITDKYSGIIPDNMEELLELPGVGR
KTANLYLYEIHGKQGVVVDTHAKRLSNRTGLTKNEDPEKIEYDLQKIIPEDKWADFCHKL
VFHGRAVCNARKPECEKCEINHLCSYYTKK
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaaggaaaaggttctgcaaatgatagaggttcttgataagctttatcctgat
gcggagtgttctttaatgtatgagaatccgcttcagcttttgatttctactcagcttgca
gcccagtgtactgatgccagagtaaatatagttgcaaagaatttatataaaaagtatcct
tcggttgaggcatttgcaaatgcaaatataagagaacttgaggaagatattaaatcaacg
ggattctatagaaataaggcaaaaaatataatcgggtgttgtaagattattactgataaa
tatagtggaataattccggataatatggaggaattacttgaattgcccggtgtaggacga
aagacagcgaatctttacttatatgagatacatggaaagcagggagtagttgttgacaca
catgcaaaaaggctttcaaacagaacgggcttaacaaagaatgaagaccccgaaaagatt
gaatacgatttgcagaaaataattcctgaagataaatgggcagatttttgccataaatta
gttttccatggaagagctgtgtgtaacgcaagaaaacctgaatgtgaaaagtgtgagata
aatcatttgtgcagttattatactaagaaatag
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