KEGG   Rhodopseudomonas palustris HaA2: RPB_0439
Entry
RPB_0439          CDS       T00321                                 
Name
(GenBank) endonuclease III / DNA-(apurinic or apyrimidinic site) lyase
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rpb  Rhodopseudomonas palustris HaA2
Pathway
rpb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RPB_0439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpb03400]
    RPB_0439
Enzymes [BR:rpb01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPB_0439
DNA repair and recombination proteins [BR:rpb03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RPB_0439
 Prokaryotic type
     RPB_0439
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S
Other DBs
NCBI-ProteinID: ABD05150
UniProt: Q2J310
LinkDB
Position
482003..482767
AA seq 254 aa
MSKITRRVAAPAAPRTAKTTPKSLAANPGQTGGKPAKPPKRPRRWTPDEVREAFTRFARA
NPEPKGELEHLNPFTLLVAVVLSAQATDAGVNKATRSLFAIADTPAKMLALGEERVREHI
KTIGLFRTKAKNVIALSQKLLSDFGGQVPSTRAELETLPGAGRKTANVVLNMAFGQPTMA
VDTHVFRVGNRTGLAPGDTPLAVELGLEKAIPPEFMQHAHHWLILHGRYTCLARKPRCEV
CLIVDLCRWPEKSV
NT seq 765 nt   +upstreamnt  +downstreamnt
atgtcgaaaatcacccgccgcgtggccgctcccgccgccccgagaaccgccaagactacc
ccgaaaagccttgcggcaaacccggggcaaaccggaggcaaacctgcgaagccgccaaaa
cgcccccgccgctggactccagacgaggttcgcgaggctttcacccgcttcgcccgcgcc
aacccggagccgaagggtgagctcgaacatctcaacccgttcaccctgctggtcgcggtc
gtgttgtcggcgcaggcgaccgatgccggcgtcaacaaggcgactcggagtttgttcgcg
atcgccgatacgccggccaagatgctggcgctcggcgaggagcgggtgcgggagcatatc
aagaccatcggcctgtttcgcaccaaggcgaaaaacgtgattgcgctgtcgcaaaaactg
ctctccgactttggtgggcaagtcccaagcacgcgcgccgagctggagacgttgccgggg
gcgggccgcaagaccgccaatgtggtgctcaacatggcgttcggtcagcccaccatggcg
gtcgatacccatgtgtttcgcgtcggcaaccgcaccgggctcgcgcccggcgacacgccg
ctcgcggtcgaactcgggctcgagaaggcgatcccgccggagttcatgcagcacgcgcac
cattggctgatcctgcacggccgctacacctgcctggcccgcaagccgcgctgcgaggtc
tgcctgatcgtcgatctgtgcaggtggccggagaaaagtgtgtag

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