Rhodopseudomonas palustris BisB5: RPD_0544
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Entry
RPD_0544 CDS
T00345
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00020
Citrate cycle (TCA cycle)
rpd00785
Lipoic acid metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01120
Microbial metabolism in diverse environments
rpd01200
Carbon metabolism
rpd01210
2-Oxocarboxylic acid metabolism
Module
rpd_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpd_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RPD_0544
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
RPD_0544
Enzymes [BR:
rpd01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
RPD_0544
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
ABE37782
UniProt:
Q13DQ7
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All DBs
Position
615785..618742
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AA seq
985 aa
AA seq
DB search
MSRQDANAAFALSSFLQGANATYIDDLYSRYENDPSSVDADWQAFFKSLKDNPGDIQKNA
EGPSWGQANWPLTPRDDLTSALDGNWAQVEKTVGQKIQTKAQTRGVELSPADVNQATRDS
VRALMLIRAYRMRGHFHAKLDPLGLSPPKDHEELDIRSYGFTEADLDRKIFLDHVLGLEY
GSLREIVAICERTYCQTMGIEFLHISNGAQKAWLQERIEGPDKEISFTREGRRAILMKLV
EAEGFERFCDLKFTGTKRFGLDGGESLIPALEQIIKRGGNLGVREIVLGMPHRGRLNVLT
QVMGKPHRALFHEFKGGSANPDEVEGSGDVKYHLGASSDREFDHNKVHLSLTANPSHLEI
VDPVVLGKVRAKQDQHGDLPEERLSVLPLLMHGDAAFAGQGVVAECFGLSDLKGYRTGGS
IHFIVNNQIGFTTYPRYSRSSPYPSDVAKMIDAPIFHVNGDDPEAVVFAAKIAVEYRQKF
HKPVVIDMFCYRRHGHNEGDEPAFTQPMMYRKIAGHPSALELYSKRLIADGVITEGEVEK
AKADWRARLDAELEAGSSYRPNKADWLDGKWAGFKSADQEEDPRRGITGVDLAQLKDIGR
KITKVPEGFRVHRTVARYLENRAKAIDSGVGIDWATGEALAFCTLLQEGHRVRLSGQDSE
RGTFSQRHSVLFDQEDETRYTPFNHLTPEQGHYEVINSLLSEEAVLGFEYGYSLAEPNAL
TIWEAQFGDFANGAQVLFDQFISSGERKWLRMSGLVCMLPHGYEGQGPEHSSARLERFLQ
MCAEDNMQVVYATTPANFFHVLRRQLRREIRKPLILMTPKSLLRHKRAVSRLDELGPDTS
FHRVLADDAQLLPDEKIKLAPDNKIRRVVICSGKVYYDLYEEREKRGVDDVYLLRVEQLY
PVPLKTLVQEMSRFKEAELVWCQEEPRNMGAWHFIEPYLEWVQNQAGATHRRPRYVGRPA
SAATASGLMSKHLAQLKAFLDEALR
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccaggacgcgaatgccgctttcgccctttcttcgtttctccagggcgcgaat
gccacctatatcgacgatctctactcccgctacgaaaacgacccgtcgtccgtcgatgcc
gattggcaggcattcttcaaaagtctgaaggacaatcctggcgacatccagaagaacgcc
gaaggcccgtcctgggggcaggccaactggccgctgaccccgcgcgacgatttgacctcg
gcgctggacggcaactgggcccaggtcgagaagaccgtcggccagaagatccagaccaag
gcgcagacccgcggcgtcgaactgtcgccggccgacgtcaaccaggccacccgcgattcc
gtccgcgcgctgatgctgatccgcgcctatcgcatgcgtggccacttccacgccaagctc
gatccgctcggcctgtcgccgcccaaggatcacgaagagctcgacatccgcagctacggc
ttcaccgaggccgatctcgaccgcaagatcttcctcgatcacgtgctgggcctggaatat
ggcagcctgcgcgagatcgtcgcgatctgcgagcgcacctattgccagaccatgggcatc
gagtttctgcatatctccaacggggcgcagaaggcctggctgcaggagcggatcgaaggt
ccggacaaggaaatcagcttcacccgcgaggggcgtcgcgcgatcctgatgaagctggtc
gaggccgagggcttcgagcggttctgcgacctcaaattcaccggcaccaagcggttcggc
ctcgacggcggcgaatcgctgatcccggcgctggagcagatcatcaagcgcggcggcaat
ctcggcgtccgcgagatcgtgctcgggatgccgcatcgcggccgcctcaacgtgctgacc
caggtgatgggcaagccgcaccgcgcgctgttccatgaattcaagggcggctcggccaat
ccggacgaggtcgaaggctccggcgacgtcaaatatcacctcggcgcttcgtcggaccgc
gagttcgaccacaacaaggtccacctgtcgctgaccgccaacccgtcgcatctcgagatc
gtcgatccggtggtgctgggcaaggtccgcgccaagcaggaccagcacggcgacttgccg
gaagagcgcctctcggtgctgccgctgctgatgcatggcgacgcggcgttcgccggacag
ggcgtggtcgcggaatgcttcggcctgtccgacctgaagggctaccgcaccggcggttcg
atccacttcatcgtcaacaaccagatcggcttcaccacctatccgcgctattcgcggtcc
tcgccgtatccgtcggacgtcgccaagatgatcgacgcgccgattttccacgtcaacggc
gacgatccggaagccgtggtgttcgcggccaagatcgcggtcgagtaccggcagaagttc
cacaagccggtcgtgatcgacatgttctgctatcgtcgccacggccataacgagggcgac
gagccggccttcacccagccgatgatgtatcgcaaaatcgcgggccatccgtcggcgctg
gaactgtattcgaagcggctgatcgccgacggcgtgatcaccgaaggcgaggtcgagaag
gccaaggccgactggcgcgcccggctcgacgccgagctcgaggccggctccagctatcgc
cccaacaaggccgactggctcgacggcaaatgggccggcttcaaatccgccgatcaggaa
gaggatccgcgccgcggcatcaccggcgtcgatctcgcgcagctcaaggatatcggccgc
aagatcaccaaggtgccggaaggcttccgggttcaccgcaccgtggcgcgctatctggag
aaccgcgccaaggcgatcgattccggcgtcggcatcgactgggcgaccggcgaggcgctg
gcgttctgcaccctgctgcaggagggccaccgcgtccgcctgtccggtcaggactccgag
cgcggcaccttctcgcagcgccattcggtgctgttcgatcaggaagacgagacccgctac
accccgttcaaccacctcacgcccgagcagggccattacgaggtgatcaactcgctgctg
tccgaagaagccgtgctcggcttcgaatacggctactcgctggccgagccgaacgcgctg
acgatctgggaagcgcagttcggcgatttcgccaacggcgcgcaggtgctgttcgaccag
ttcatctcgtcgggcgagcgcaaatggctgcggatgtccggtctcgtctgcatgttgccg
cacggctatgagggccagggaccggagcactcgtccgcccggctcgagcgcttcctgcag
atgtgcgccgaggacaacatgcaggtggtctacgccaccacgccggcgaattttttccac
gtgctgcgccgccagctccgtcgcgagatccgcaagccgctgatcctgatgacgccgaaa
tcgctgctgcgccacaagcgggcggtgtcgcggctcgacgaactcggccccgataccagc
ttccaccgcgtgctggccgacgatgcgcagttgctgccggacgagaagatcaagctcgcc
ccggacaacaagatccgccgcgtcgtgatctgctccggcaaggtctattacgacctctac
gaggagcgcgagaagcgcggcgtcgacgacgtctatctgctgcgcgtcgagcagctctat
ccggtgccgctgaagacgctggtgcaggagatgtcgcgtttcaaggaagccgagctggtg
tggtgccaggaagagccgcgcaacatgggggcgtggcacttcatcgaaccttatctggag
tgggtgcagaatcaggcgggggcgacccatcgccgcccgcgttatgtcggccgcccggca
tccgcggccaccgcgtccggcctgatgtcgaagcatctggcccagctcaaggcgttcctc
gacgaggcgctgcgctga
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