Rhodopseudomonas palustris BisB5: RPD_2557
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Entry
RPD_2557 CDS
T00345
Name
(GenBank) cystathionine beta-lyase
KO
K01760
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00270
Cysteine and methionine metabolism
rpd00450
Selenocompound metabolism
rpd01100
Metabolic pathways
rpd01110
Biosynthesis of secondary metabolites
rpd01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RPD_2557
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RPD_2557
Enzymes [BR:
rpd01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
RPD_2557
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Motif
Pfam:
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABE39787
UniProt:
Q137F2
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Position
complement(2862171..2863370)
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AA seq
399 aa
AA seq
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MDPSNHDGTQPSLSPQTRLVTSGRDTKAQKGFVNPPVVRGSTVLYPTAEDLHAHRGEYSY
GRHGTPTTKALQQALIELEGPQCAGVGLTPSGVSAISTALLAVLKAGDHVLVCDNTYRPT
RLLCDQMLQRYGIETSYFDPLIGAGIAAHIRPNTAVVMVEAPGSQSLEMPDIPAIAAVAH
AHGALVIDDNTWATPLYHRSLEQGVDISIQAGTKYIGGHSDIMFGTIAANKTAWPKIADA
IRLLGVCAGPDDVFLALRGLRTLAVRLAQHQQSGLEMARWLGERPEVQRVLHPALESDPG
HAIWKRDFTGASGLFSIVLQPAPQKAVDALLDTVKLFGMGYSWGGFESLVIPFDCASYRT
ATTWNPGGPALRLHVGLECVDDLKADLARGFEAFNASLR
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggatccttccaatcacgacggaacacaaccgtcgctcagcccgcagacccggctcgtg
acgtcggggcgcgacaccaaggcgcagaagggtttcgtcaatcctccggtggtgcgcggt
tcgaccgtgctttacccgaccgcagaagacctgcatgcacatcgcggcgagtactcgtac
gggcgtcacggcacgccgaccacaaaggctttgcagcaggcgctgatcgagctggaaggt
ccgcaatgcgccggcgtcggactgacgccttccggcgtgtccgcgatttcgaccgccctg
ctcgcggtgctcaaggccggcgatcatgtcctggtttgtgacaacacctaccgcccgacg
cggctgctctgcgaccaaatgctgcaacgctacggtatcgagaccagctatttcgatccg
ctgatcggcgccggcatcgccgcccatatccggccgaacaccgccgtggtgatggtcgag
gcgccaggctcgcaatccttggagatgccggacattccggcgatcgccgcggtcgcgcac
gcgcatggcgcgctggtgatcgacgacaatacctgggcgaccccgctgtatcatcgctcc
ctcgagcagggcgtcgatatttcgatccaggccggcaccaagtatatcggcggccattcc
gacatcatgttcggcacgatcgccgccaacaagacggcgtggccgaagatcgcagacgcg
atccgcctgctcggcgtctgcgccggacctgacgatgtgttcctggcgttgcgcggcctg
cgcacgctcgcggtgcggctggcgcagcatcagcagtccggtctggagatggcgcgctgg
ctcggcgaacggcccgaggtgcagcgggttctgcatccggcgctggagagcgatccggga
cacgcgatctggaagcgcgactttaccggcgcgtccggtttgttctcgatcgtgctgcag
ccagccccgcaaaaggcggtcgacgccctgctcgacaccgtcaagctgttcggcatgggc
tattcgtggggcggcttcgagagccttgtcatcccgttcgactgcgcgtcctatcgcacg
gcgacgacatggaatcccggcggaccggcgctgcggctccatgttggcctcgaatgcgtc
gacgacctgaaggccgatctcgcacgcggcttcgaggccttcaacgcgtcgctgcgttga
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