Rhodopseudomonas palustris BisB5: RPD_4038
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Entry
RPD_4038 CDS
T00345
Name
(GenBank) Isoleucyl-tRNA synthetase
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
rpd
Rhodopseudomonas palustris BisB5
Pathway
rpd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rpd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RPD_4038
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rpd01007
]
RPD_4038
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpd03016
]
RPD_4038
Enzymes [BR:
rpd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
RPD_4038
Amino acid related enzymes [BR:
rpd01007
]
Aminoacyl-tRNA synthetase
Class I (U)
RPD_4038
Transfer RNA biogenesis [BR:
rpd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RPD_4038
Prokaryotic type
Other AARSs
RPD_4038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1e
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
ABE41257
UniProt:
Q131I2
LinkDB
All DBs
Position
complement(4487627..4490632)
Genome browser
AA seq
1001 aa
AA seq
DB search
MSDKSEKSDVNDYSKTLFLPQTEFPMRAGLPQREPELLKRWEEIDLYGKLREAARGRAKF
VLHDGPPYANGNIHIGHALNKILKDVVTKSQQMLGYDSNYVPGWDCHGLPIEWKIEEENY
RSKGKPKPNFKDSTAMVAFRKECRAYATKWLNVQREEFKRLGLIGDWDHPYATMDYFAEA
QIARELMKFAANGTLYRGSKPVMWSVVEKTALAEAEVEYEDYTSDTVWVKFAVKSGDAAV
SSASVVIWTTTPWTLPGNRAISFSSKIGYGLYKVTDAPADNWAKTGDLLILADALAESVF
KQARVAAYDKVSAVAPDVLKAIECAHPLRGLAGGYEFTVPLLDGDHVTDDTGTGFVHTAP
GHGREDFDIWMHNARALEARGISSAIPYTVDENGAFTEHAPGFVGKRVINDKGEKGDANE
AVIQELIACGALLARGKLKHQYPHSWRSKKPVIFRNTPQWFIAMDKDIADGDAAKPGDTL
RARALQAISVTQWVPAAGQNRINGMISGRPDWVISRQRAWGVPIAVFVREKGDGSAEILV
NDEVNKRIADAFVEEGADAWYMEGARDRFLGSLANEDWQKVDDILDVWFDSGSSHAFVLE
DPVHFPGLAGIRRKVDGGADTVMYLEGSDQHRGWFHSSLLESCGTRGRAPYDVVLTHGFT
LDEQGRKMSKSIGNTVEPQKVIAQSGADILRLWVCATDYADDQRIGPEILKNVVETYRKL
RNSIRWMLGTLHHFKRDEAVAFADMPELERLMLHQLAEQSAVVRAAYAEFDYKTVVASLA
TFMNTELSAFYFDIRKDTLYCDPPSSLARKAALTAIDIICDAVLKWLAPVLSFTADEAWA
MVRPDAEPSVHLTLFPLELGAYRDDALAKKWTLIRAVRRVVTGALEVERAAKRIGSSLEA
SPMIYLPEQFMGDIFDVDWAEICITSNAMVEILRGNDTPPADAFRLPELANVAVVVERAQ
GAKCARSWKILSSVGSDPDYPDVSPRDAQALREWKALGAPV
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacaagtctgaaaaatccgacgtcaacgactattccaagacgctcttcctgccg
cagacggagtttccgatgcgcgccgggctgccgcagcgcgagccggaattgctcaagcgc
tgggaggagatcgacctctacggcaagctgcgcgaagctgcccggggccgcgccaaattc
gtgctgcacgacggcccgccttacgccaacggcaacatccatatcggccacgcgctcaac
aagatcctcaaggacgtcgtgaccaagagccagcagatgctcggctacgattccaactat
gtgccgggctgggattgtcacggcctgccgatcgaatggaagatcgaggaggagaactac
cgctccaaaggcaagccgaagccgaacttcaaggattcgacggcgatggtcgcgttccgc
aaggaatgccgggcgtacgcgacgaagtggctcaacgtgcagcgcgaggaattcaagcgg
ctcggcctgatcggcgactgggaccatccctacgccacgatggactactttgccgaagcc
cagatcgcccgcgaactgatgaaattcgccgccaacggcacgctgtatcgcggcagtaag
ccggtgatgtggagcgtggtcgaaaagaccgcgctggccgaggccgaggtcgagtacgag
gactacacttcggatacggtgtgggtgaagtttgcggtgaagtccggcgatgcggcggtg
agcagcgccagcgtcgtgatctggaccaccacgccgtggacgctgccgggcaatcgcgcg
atcagcttctcgtccaagatcggctacggtctctacaaggtcaccgacgcgccggctgat
aattgggccaagactggcgatctgctgatcctcgccgatgcgctcgctgaaagcgtattc
aagcaggcgcgtgtcgctgcgtatgacaaggtttcggccgttgcacctgacgtcctgaag
gcgatcgaatgcgcgcatccgctgcgcggcctcgccggcggctatgaattcaccgtcccg
ctgctcgatggcgatcacgtcaccgacgacaccggcaccggcttcgtccacaccgcgccc
ggccatggccgcgaggacttcgacatctggatgcacaatgcgcgcgcgctcgaggcgcgc
ggcatctcctcggcgatcccctacaccgtcgacgagaacggcgcgttcacggagcatgcg
ccaggcttcgtcggcaagcgggtgatcaacgacaagggcgagaagggcgacgccaacgag
gcggtgattcaagaattgatcgcgtgcggcgcgctgctggcgcgcggcaagctcaagcat
caatatccgcattcgtggcgctcgaagaagccggtgatcttccgcaacacgccgcaatgg
ttcatcgcgatggacaaggacatcgccgatggcgatgccgcgaagcccggcgacacgctg
cgcgcccgcgcgctgcaggcaatctcggtcacccaatgggtgccggcggcggggcaaaac
cgcatcaacggcatgatctccggccggcccgactgggtgatctcgcggcagcgcgcctgg
ggcgtgccgatcgcggtgttcgtgcgcgagaagggcgacggctccgccgagattctcgtc
aatgacgaggtcaacaagcgcatcgccgacgccttcgtcgaagagggcgccgacgcctgg
tacatggaaggcgcgcgcgatcggttcctcggctcgctcgccaatgaagactggcagaag
gtcgacgatattctcgatgtctggttcgactcgggctcgagccacgctttcgtgctggaa
gatccggttcacttccccggcctcgccggcatccgccgcaaggtcgacggcggcgccgac
accgtgatgtatctcgaaggctcggaccagcatcgcggctggttccactcgtcgctgctg
gagagctgcggcacccgcggccgcgcgccctacgacgtggtgctgacccacggcttcacg
ctcgacgagcagggccgcaagatgtcgaagtcgatcggcaacacggtcgagccgcagaag
gtgatcgcgcaatccggcgccgacatcctgcggctgtgggtgtgcgccaccgactacgcc
gacgatcagcgcatcggcccggaaatcctcaagaacgtggtcgagacctatcgcaagctg
cgcaactcgatccgctggatgctcggcacgctgcatcatttcaagcgcgacgaggcggtg
gcgttcgccgacatgcccgagctggagcggctgatgctgcatcagctcgccgaacaaagt
gctgtggtgcgcgccgcctatgccgagttcgactacaagaccgtggtcgcctcgctcgcc
accttcatgaacaccgaattgtcggcgttctatttcgacatccgcaaggacacgctgtat
tgcgacccgccgtcctcgctggcgcgcaaggcggcgctgaccgcgatcgacatcatctgc
gacgcggtcctgaaatggctggcgccggtgctgtccttcaccgccgacgaggcgtgggcg
atggttcgccctgacgccgagccgagcgtgcatctgacgctgttcccgctcgaactcggc
gcctatcgcgacgatgcgctggcgaagaagtggacgctgatccgcgcggtccgccgcgtc
gtcaccggcgcgttggaagtcgagcgcgcagcgaagcggatcggctcatcgctcgaagct
tcgccgatgatctatctgcccgaacaattcatgggcgacattttcgacgtcgattgggcc
gaaatctgcatcacctcgaacgcaatggtcgagatcctgcgcggcaacgacacgccgccg
gcggatgccttccggctgccggagctggccaacgtcgcggtggtggtcgaacgcgcgcag
ggcgccaaatgcgcccgctcctggaagatcctgtcgagcgtcggcagcgatcccgactat
cccgacgtctcgccgcgcgacgcccaggcgctgcgcgagtggaaggcgctgggggctccg
gtctga
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