Rhodopseudomonas palustris BisA53: RPE_0300
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Entry
RPE_0300 CDS
T00400
Name
(GenBank) malate dehydrogenase (NAD)
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00020
Citrate cycle (TCA cycle)
rpe00270
Cysteine and methionine metabolism
rpe00620
Pyruvate metabolism
rpe00630
Glyoxylate and dicarboxylate metabolism
rpe00680
Methane metabolism
rpe00710
Carbon fixation by Calvin cycle
rpe00720
Other carbon fixation pathways
rpe01100
Metabolic pathways
rpe01110
Biosynthesis of secondary metabolites
rpe01120
Microbial metabolism in diverse environments
rpe01200
Carbon metabolism
Module
rpe_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpe_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpe_M00012
Glyoxylate cycle
rpe_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RPE_0300
00620 Pyruvate metabolism
RPE_0300
00630 Glyoxylate and dicarboxylate metabolism
RPE_0300
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
RPE_0300
00720 Other carbon fixation pathways
RPE_0300
00680 Methane metabolism
RPE_0300
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RPE_0300
Enzymes [BR:
rpe01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
RPE_0300
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
Motif
Other DBs
NCBI-ProteinID:
ABJ04259
UniProt:
Q07UX5
LinkDB
All DBs
Position
complement(339947..340915)
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AA seq
322 aa
AA seq
DB search
MARDKIALIGSGQIGGTLAHLVGLKELGDVVMFDIAEGIPQGKALDIAQSSPVDGFDAKF
TGANSYEALDGASVCIVTAGVPRKPGMSRDDLLSINLKVMEQVGAGIKKYAPNAFVICIT
NPLDAMVWALQKACGLPHNKVVGMAGVLDSARFRYFLADEFNVSVEDVTAFVLGGHGDTM
VPLVKYSTVAGIPLPDLVKMGWTSQARLDEIVDRTRNGGAEIVNLLKTGSAFYAPATSAI
AMAESYLRDKKRVVPVAAYLNGEYGVKDMYVGVPVVIGAKGVERIVEIELAGKDREAFDK
SVGAVQGLVEACKKIAPELLGA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcgacaagattgctttgattggctccggtcagatcggtgggaccttggctcac
ctcgtcggcctgaaggaactcggcgacgtggtgatgttcgacatcgccgaaggcattccg
cagggcaaggcgctcgatatcgcccagtcatcaccggttgacgggttcgacgccaagttc
accggcgcaaattcgtacgaggcgctcgacggcgccagcgtctgcatcgtcaccgccggc
gtgccgcgcaagcccggcatgagccgcgacgatctcctcagcatcaacctcaaggtgatg
gagcaggtcggcgccggcatcaagaaatacgcgcccaacgccttcgtgatctgcatcacc
aacccgctcgacgccatggtgtgggcgctgcagaaggcctgcggcctgccgcacaacaag
gtggtcggcatggccggcgtgctggactcggcgcggttccgctatttcctggccgatgag
ttcaacgtctcggtcgaggacgtcaccgccttcgtgctcggcggtcatggcgacaccatg
gtgccgctggtgaagtactccaccgtcgccggcattccgctgcccgacctggtgaagatg
ggctggacctcgcaggcgcgtctcgacgagatcgtcgaccgcacccgcaatggcggcgcc
gagatcgtcaacctgctgaagaccggctcggcgttctatgcccccgccacctcggcgatc
gcgatggccgagagctatctgcgcgacaagaagcgcgtggtgccggtggcggcctatctc
aacggcgaatacggcgtgaaggacatgtatgtcggcgtgccggtggtgatcggcgccaag
ggcgtcgagcgcatcgtcgagatcgaactggccggcaaggaccgcgaagccttcgacaag
tcggtcggcgcggtgcagggtctggtcgaggcctgcaagaagatcgcgcccgagctgctc
ggggcctga
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