KEGG   Rhodopseudomonas palustris BisA53: RPE_0488
Entry
RPE_0488          CDS       T00400                                 
Name
(GenBank) DNA-(apurinic or apyrimidinic site) lyase / endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
rpe  Rhodopseudomonas palustris BisA53
Pathway
rpe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RPE_0488
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpe03400]
    RPE_0488
Enzymes [BR:rpe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPE_0488
DNA repair and recombination proteins [BR:rpe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     RPE_0488
 Prokaryotic type
     RPE_0488
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S Ogg-HhH RecR_HhH
Other DBs
NCBI-ProteinID: ABJ04447
UniProt: Q07UD7
LinkDB
Position
536418..537212
AA seq 264 aa
MTKSIKPAKAGPGTGKLKTAKAAKIAEPKRAKSDRVKRPATPGGHFKLRPTKPWSEAEIT
EAFARFEKASPEPKSELEHFNPFTLLVAVVLSAQATDAGVNRATRPLFEIADTPQKMLAL
GEEKVREFIKTIGLYRNKARNVIALSQKLIEDFGGQVPNSREALETLPGAGRKTANVVLN
VAFGQPTMAVDTHVFRVANRTGLAPGETPLAVELGLEKVIPSRFMAHAHHWLILHGRYTC
LARKPRCETCLINDLCRWPEKTVG
NT seq 795 nt   +upstreamnt  +downstreamnt
atgacgaaatcgatcaagccggcaaaagccggaccgggaaccggcaagctgaagacggcc
aaggccgcgaaaattgccgaacccaaacgggccaaatccgaccgcgtgaagcgaccggcg
acgcccggcggccacttcaagctgcggccgacaaaaccctggagcgaggccgagatcacc
gaggcgtttgcgcgattcgagaaggccagtccggagccgaagagcgaactcgagcacttc
aatccgttcacgctgctggtcgccgtggtgctgtcggcgcaggccaccgacgccggggtc
aaccgggcgacaagaccgctgttcgagatcgccgacacgccgcagaagatgctggcgctc
ggcgaggaaaaagtgcgcgagttcatcaagaccatcgggctgtatcgcaacaaggcgcgc
aacgtgatcgcgttgtcgcaaaaactgatcgaggattttggcgggcaggtgccgaacagc
cgcgaggcgctggagacgctgccgggcgcgggccgcaagacagccaatgtggtgctcaac
gtcgccttcggtcagccgaccatggcggtcgacacccacgtgttccgcgtcgccaaccgc
accggtctggcgccgggcgagacgccgcttgcggtcgagctgggactggagaaggtgatt
ccgtcacgtttcatggcgcatgcgcatcactggctgatcctgcacggccgctacacctgt
ctggcgcgaaagccgcgctgcgagacctgcctgatcaacgatttgtgccgctggccggaa
aagacggtggggtaa

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