Rhizobium phaseoli: AMC79_CH03070
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Entry
AMC79_CH03070 CDS
T04590
Symbol
metH
Name
(GenBank) B12-dependent methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rpha
Rhizobium phaseoli
Pathway
rpha00270
Cysteine and methionine metabolism
rpha00450
Selenocompound metabolism
rpha00670
One carbon pool by folate
rpha01100
Metabolic pathways
rpha01110
Biosynthesis of secondary metabolites
rpha01230
Biosynthesis of amino acids
rpha04980
Cobalamin transport and metabolism
rpha04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rpha00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AMC79_CH03070 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
AMC79_CH03070 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMC79_CH03070 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMC79_CH03070 (metH)
04980 Cobalamin transport and metabolism
AMC79_CH03070 (metH)
Enzymes [BR:
rpha01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
AMC79_CH03070 (metH)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
ANL98840
LinkDB
All DBs
Position
complement(3109165..3112938)
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AA seq
1257 aa
AA seq
DB search
MFDTLFGPETGKRDGSEVFAALRKAASERILVLDGAMGTQIQGLGYDEDQFRGTRFIGCA
CHQKGNNDLLILTQPDAIEEIHYKYAKAGADILETNTFSSTRIAQADYEMENAVYDLNKE
GAEIVRRAALRAEREDGRRRFVAGAIGPTNRTASISPDVNNPGFRAVTFDDLRSAYGEQI
DGLIDGGADIILIETIFDTLNAKAAIFACEERFEAKGVRLPVMISGTITDLSGRTLSGQT
PSAFWNSVRHANPFTIGLNCALGANAMRPHLQELSGVADTFICAYPNAGLPNEFGQYDET
PELMAAQIDSFAREGLVNIVGGCCGSTPEHIRAIAETVAKYKPRPIPEHRPFMSLSGLEP
FELTKDIPFVNVGERTNVTGSAKFRKLITNADYTAALDVARDQVENGAQVIDINMDEGLI
DSEKAMVEFLNLIAAEPDIARVPVMIDSSKFSIIESGLKRVQGKPIVNSISLKEGEENFL
AQARLLRNYGAAVVVMAFDETGQADNYDRKVEICTRAYKLLTEKIGFPPEDIIFDPNIFA
VATGIEEHNNYGVDFIEATRTIRERMPLVHISGGVSNLSFSFRGNEPVREAMHAVFLYHA
IQAGMDMGIVNAGQLAVYDNIDPELREACEDVVLNRRPDSTERLLEVAERFRGAGAKEGR
IQDLSWREWSVEKRLEHALVNGITEYIEADTEEARQQAARPLHVIEGPLMAGMNVVGDLF
GSGKMFLPQVVKSARVMKQAVAVLLPYMEEEKRLTGGDDRQSAGKILMATVKGDVHDIGK
NIVGVVLACNNYEIVDLGVMVPATKILETAIAEKVDVIGLSGLITPSLDEMVHVAAEMER
QGFEIPLLIGGATTSRVHTAVKIHPGYNKGQAIYVTDASRAVGVVSALLSPETRQGYVDD
VRAEYAKVAAAHARSEAEKVRLPLPRARENAHKLDWSAYKPTKPQFFGTRVFEDYDLAEL
AKYIDWTPFFQTWELRGRYPAILEDEKQGEAARALWADAQAMLKKIIDEKWFRPRAVIGF
WPAGAVGDDIRLFTDESRSHELATFYTLRQQLSKRDGRANVALSDFVAPVTSGVQDYVGG
FVVTAGIEEIAIAERFERANDDYSSILVKALADRFAEAFAERMHEQVRREYWGYAMDEHL
SNEDLITEAYAGIRPAPGYPAQPDHTEKKTLFKLLDAEHTAGVKLTESYAMWPGSSVSGL
YIGHPDSYYFGVAKVERDQVEDYAKRKGMEISEVERWLGPVLNYVPRKADEEIEDAA
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgatactctctttggtccggaaacgggcaaacgtgacggcagtgaagttttcgca
gcgctgcgcaaagccgccagcgagcgcatcctcgtcctcgacggcgccatgggcacgcag
atccagggactcggctatgacgaggaccagttccgcggcacccgcttcatcggctgcgcc
tgccatcagaaaggcaataacgacctcctgatcctgacccagccggatgcgatcgaagag
atccattacaaatacgccaaggccggcgccgatattctcgagaccaacaccttctcctcg
acccgtatcgcccaggccgattacgagatggaaaatgcggtctacgacctcaacaaggaa
ggtgcggagatcgtccgccgcgcggcactgcgcgccgagcgcgaggacggccgccgccgc
ttcgttgccggcgccatcggtcccaccaaccgcaccgcctcgatctcgcccgacgtcaac
aatcccggtttccgcgccgtcaccttcgatgatctgcgctctgcctatggcgagcagatc
gacggcctgatcgacggcggcgccgacattatcctgatcgaaacgatcttcgacacgctg
aacgccaaggcggcgatcttcgcctgcgaggagcgcttcgaggccaagggcgtgcgcctg
ccggtgatgatctccggcacgatcaccgacctttccggtcgcacgctgtccggccagacg
ccgtcggccttctggaactcggtgcgtcacgccaatcccttcaccatcggcctcaactgc
gcgctcggcgccaatgcgatgcgcccgcatctgcaggagctttcgggtgttgccgacacc
ttcatctgcgcctatccgaatgccggcctgccgaacgagttcggccagtatgacgagacg
ccggagctgatggcggcgcagatcgacagcttcgcccgcgaaggcctggtcaacatcgtc
ggcggctgctgcggctcgacgccggaacatatcagggcgatcgccgagaccgtcgccaag
tacaagccgcgcccgatccccgagcaccgccccttcatgtcgctgtcgggtctcgaacct
ttcgagctgaccaaggacattcctttcgtcaacgtcggcgagcgcaccaacgtcaccggc
tcggcgaagttccgcaagctgatcaccaatgccgattacacggcagcgctcgatgtcgcg
cgcgaccaggtcgagaacggcgcgcaggtgatcgacatcaacatggacgagggcctgatc
gattccgaaaaggcaatggtcgagttcctcaacctgatcgccgccgagcccgatatcgcc
cgcgtgcccgtgatgatcgacagttcgaaattctcgattatcgaatccggcctgaagcgc
gtgcagggcaagccgatcgtcaactcgatctcgctgaaggaaggcgaggagaatttcctc
gcccaggcgcggctcctgcgcaattacggcgctgccgtcgtcgtcatggccttcgacgag
acgggccaggccgacaattacgaccgcaaggtcgagatctgcacccgcgcctataagctt
ttgacggaaaagatcggcttcccgcccgaggatatcatcttcgacccgaacatcttcgcg
gtcgccaccggcatcgaagaacacaataattacggcgtcgacttcatcgaggcgacccgg
acgatccgcgagcgcatgccgctcgtccatatatcaggcggcgtttcgaacctgtccttc
tcgttccgcggcaacgagccggtgcgcgaggcgatgcacgccgtgttcctctatcacgcc
atccaggcgggcatggacatgggcatcgtcaatgccggtcagcttgccgtctacgacaac
atcgaccccgaattgcgcgaggcctgcgaagacgtggtgctgaaccgccgtcccgacagc
accgagcgactgctggaagtggccgagcgtttccgcggcgccggagccaaggagggccgg
atccaggacctttcctggcgcgaatggagcgtcgagaagcgccttgagcatgcgctggtc
aacggtattacagagtatatcgaagccgataccgaggaggcgcgccagcaggccgcccgg
ccgctgcatgtcatcgaagggccgctgatggccggcatgaacgtggtcggcgatctcttc
ggttcgggcaagatgttcctgccgcaggtggtcaagtcggcgcgcgtcatgaagcaggcg
gtcgccgtgctgctgccctacatggaagaggaaaagcgcctcacaggcggcgacgatcgc
cagtcggccggcaagatcctgatggcgacggtcaagggtgacgtgcacgatatcggcaag
aacatcgtcggtgtcgtgcttgcctgcaacaattacgagatcgtcgacctcggcgtcatg
gtgccggcgacgaagattttggaaacggcgatcgccgagaaggtcgacgtcatcggcctt
tccggcctgatcacgccgtcgctggacgagatggtgcatgtcgcggccgaaatggagcgg
cagggcttcgagatcccgctgctgattggtggagcgacgaccagccgtgtgcacacggcg
gtcaagatccatcccggctacaacaagggccaggcgatctatgtcaccgacgcgagccgc
gctgtcggcgtcgtctcggcgctgctctcgccggaaacgcggcagggctatgtcgacgac
gttagagccgaatatgccaaggtggcggccgctcatgcccgcagcgaagccgagaaggtg
cgcctgccattgccgcgggctcgcgaaaatgcccataagctcgactggtctgcctacaag
ccgaccaagccgcaattcttcggtacccgggtgttcgaggattacgatctggccgagctt
gcgaagtacatcgactggacgccgttcttccaaacctgggaactgcgcggccgctacccc
gccatcctcgaagatgagaagcagggcgaggcggcgcgtgcgctctgggccgacgcccaa
gccatgctcaagaagatcatcgacgagaagtggttccgtccgcgcgccgtcatcggcttc
tggccggccggcgccgtcggcgacgatatccgcctgtttaccgacgagagccgcagccac
gagcttgccaccttctacaccctgcgccagcagctttcgaagcgcgatgggcgggcgaac
gtggcgctctccgatttcgtggcgcctgtcacaagcggcgtgcaggactatgtcggcggt
ttcgtggtgacggccggcatcgaggagatcgccatcgccgaacggtttgagcgggcgaac
gacgactattcctcgatcctcgtcaaggcgctggccgaccgcttcgcggaagctttcgcc
gagcgcatgcacgagcaggtgcggcgcgaatattgggggtatgcgatggatgagcacctc
agcaacgaggatctcatcaccgaggcctatgccggcatccgtcccgcacccggttatccc
gctcagcccgaccacaccgagaagaagacactcttcaagctgctcgatgcggaacatacc
gcgggcgtgaagctgacggaaagctatgcgatgtggcccggctcatccgtctcgggtctc
tatatcggccaccccgactcctactatttcggcgtcgccaaggtggagcgcgatcaggtg
gaagactatgccaagcgcaagggcatggagatttccgaagtcgagcgctggctcggacct
gtgctgaactacgtgccgcgcaaggcggacgaggagatcgaggacgcggcctga
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