Roseovarius phycicola: RZ517_12385
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Entry
RZ517_12385 CDS
T10600
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
rphc Roseovarius phycicola
Pathway
rphc00540
Lipopolysaccharide biosynthesis
rphc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
RZ517_12385 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rphc01005
]
RZ517_12385 (lpxC)
Enzymes [BR:
rphc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
RZ517_12385 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
rphc01005
]
Lipid A
RZ517_12385 (lpxC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
WWR45590
LinkDB
All DBs
Position
complement(2438856..2439779)
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AA seq
307 aa
AA seq
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MQTTINIPATFEGVGLHSGEPCSMTIRSAGVDHGIVFRRMDVSADQQDLPAIWDKVNQSP
LCTRLQNDAGVTLSTIEHIMAALCGCGVHNALIEVSGPEVPILDGSSAKFVQGILAAGVL
PLDAPIKALRVLKPVEVRRGDALARLLPNDTLTIEFKIEFEDSAIGAQSKVLNMANGSFV
RELSTSRTFCRQADVDAMQANGLALGGSSGENAVVFDGDRVVSPGGLRQPDEPVRHKMLD
ALGDLALAGLPILGHYQGERAGHALTNDLLRALFADPEAFEVVTCDAAMAARLPGAGVHW
GEIPEVA
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgcagacaacgattaacattccagcgacgtttgagggcgtcggcttgcactcgggcgag
ccgtgctcaatgacgattcgctcggcgggcgtcgatcatggcatcgtcttccgccgcatg
gatgtgtctgccgatcaacaagacttgcctgctatctgggacaaggtgaatcaatcgccg
ctctgcacacgtttgcagaacgatgccggtgtgaccctgtccaccatcgaacatattatg
gcggccttgtgtggctgtggcgttcataacgcgctgatcgaagtgtccggccctgaagtg
ccgatcctcgacggcagctctgcgaagtttgttcagggtatacttgcggctggtgttctt
ccgcttgatgcgccgatcaaggcgctacgggtgctcaaaccggttgaagtccgtcgcggt
gatgcactggcgcggctgttgccgaatgacactctgaccatcgaattcaaaatcgagttt
gaagattcggcgattggcgcgcagagcaaagtgctcaatatggccaacggaagctttgtt
cgtgagctgtcaacttcgcgcaccttctgccgtcaggcggatgttgacgctatgcaggcg
aatggcttggctctgggcggaagttcaggtgaaaacgcagttgtttttgatggtgatcgc
gtcgtcagccccggtggtttgcgtcaaccagacgaacctgtacgccacaagatgctggat
gctctgggcgacctggctttggcaggcctgccgattctggggcattatcagggtgagcgc
gcgggtcatgcactgaccaatgatcttctgcgggcgctttttgccgatccagaagcgttt
gaggtggtcacatgtgacgccgcaatggcggcacgtttgccaggggctggtgtgcattgg
ggcgaaatccccgaggttgcgtga
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