KEGG   Ruditapes philippinarum (Manila clam): 132713197
Entry
132713197         CDS       T09557                                 
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
  KO
K07966  beta-1,4-galactosyltransferase 1 [EC:2.4.1.22 2.4.1.90 2.4.1.38 2.4.1.-]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi00052  Galactose metabolism
rphi00510  N-Glycan biosynthesis
rphi00513  Various types of N-glycan biosynthesis
rphi00514  Other types of O-glycan biosynthesis
rphi00515  Mannose type O-glycan biosynthesis
rphi00533  Glycosaminoglycan biosynthesis - keratan sulfate
rphi00601  Glycosphingolipid biosynthesis - lacto and neolacto series
rphi01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00052 Galactose metabolism
    132713197
  09107 Glycan biosynthesis and metabolism
   00510 N-Glycan biosynthesis
    132713197
   00513 Various types of N-glycan biosynthesis
    132713197
   00515 Mannose type O-glycan biosynthesis
    132713197
   00514 Other types of O-glycan biosynthesis
    132713197
   00533 Glycosaminoglycan biosynthesis - keratan sulfate
    132713197
   00601 Glycosphingolipid biosynthesis - lacto and neolacto series
    132713197
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:rphi01003]
    132713197
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rphi04131]
    132713197
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rphi04147]
    132713197
Enzymes [BR:rphi01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.22  lactose synthase
     132713197
    2.4.1.38  beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
     132713197
    2.4.1.90  N-acetyllactosamine synthase
     132713197
Glycosyltransferases [BR:rphi01003]
 Glycan extension
  Type 2 chain/Poly-N-acetyllactosamine
   132713197
Membrane trafficking [BR:rphi04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    132713197
Exosome [BR:rphi04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   132713197
SSDB
Motif
Pfam: Glyco_transf_7N Glyco_transf_7C CHGN
Other DBs
NCBI-GeneID: 132713197
NCBI-ProteinID: XP_060551668
LinkDB
Position
Unknown
AA seq 385 aa
MHSKRLKFFVRIVLIFSVISNVLFCLGSVYYISNCNGVVLKDMALTGTGGDQGDTPTWNN
INHRNVEMLPQWSKLNISAQFPYEEIKENIDTVCPDRPPQLVGRMNISGKVKPEDVFNVT
SLKMVRPGGHYIPACKQEEKVAIIVPYRDRENHLQILLYHLHTFLQKQQLHYAVFVVEMA
YPTQFNRGILANIGYLTSREILNFTCYIIHDVDLLPADDRNLYRCSDNPRHLSVSSSKYG
YKLPYGHYNGGVVAFTSTQFEKINGFSNAYFGWGKEDDDLHKRILKSGFKIDRPDAKIGD
YEEIVRQDIQDLTNPDNPMKDSLYLWAEKRFKNDGINSVLYQRIALEFLPLYTWVYVNTS
ELTVMKMIKHIDPGLKEAFARVKKA
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgcattcgaaacgattaaaatttttcgtaaggatagttttgatattttctgtgatatca
aatgttctgttctgtttaggaagtgtgtattacatttcaaactgtaatggtgtagtttta
aaagatatggcactgactggaactggtggtgaccagggcgacacaccaacatggaataat
attaatcatcggaatgttgagatgttaccgcaatggtccaaacttaacataagtgctcaa
tttccatatgaagagataaaagaaaacattgacacagtgtgtccagatcgtccaccacaa
cttgttggtaggatgaatataagtggtaaggtaaagccagaggatgtgttcaacgttacc
tcactgaaaatggttcgcccaggtggacattacatcccagcttgtaaacaggaggaaaag
gtcgctataatagtgccgtacagagacagagagaatcatttacagatattgctctatcac
ctgcacacgtttcttcagaaacaacaattacattacgccgtgtttgttgttgaaatggcg
tacccgacccagtttaatagaggtattttggcaaatattggttatcttacatctcgagag
attttgaatttcacgtgctatattatccacgacgttgatttattaccagcagacgataga
aacctttatagatgttccgacaatcccagacatctttctgtcagctccagtaaatatgga
tacaagttaccttatggccattacaatggtggagttgtagcattcacaagcacacagttt
gaaaaaattaacggattcagcaatgcttactttggttggggtaaagaagatgacgattta
cataaacggatcttaaagtctggttttaagattgacagacctgacgctaaaatcggagat
tatgaggaaatagttagacaggatattcaagatctcacgaatccagataacccaatgaag
gacagtttatacctgtgggctgaaaaaaggtttaagaatgacggaatcaatagcgttctt
tatcaaagaattgcgctcgaatttctaccattatatacgtgggtatatgtcaacacaagt
gaactgaccgtcatgaaaatgataaaacatatcgatcctggtctaaaagaagcgtttgca
cgtgtgaagaaagcctaa

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