Ruditapes philippinarum (Manila clam): 132713197
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Entry
132713197 CDS
T09557
Name
(RefSeq) beta-1,4-N-acetylgalactosaminyltransferase bre-4-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00052
Galactose metabolism
rphi00510
N-Glycan biosynthesis
rphi00513
Various types of N-glycan biosynthesis
rphi00514
Other types of O-glycan biosynthesis
rphi00515
Mannose type O-glycan biosynthesis
rphi00533
Glycosaminoglycan biosynthesis - keratan sulfate
rphi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
132713197
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
132713197
00513 Various types of N-glycan biosynthesis
132713197
00515 Mannose type O-glycan biosynthesis
132713197
00514 Other types of O-glycan biosynthesis
132713197
00533 Glycosaminoglycan biosynthesis - keratan sulfate
132713197
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
132713197
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132713197
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132713197
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132713197
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
132713197
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
132713197
2.4.1.90 N-acetyllactosamine synthase
132713197
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
132713197
Membrane trafficking [BR:
rphi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132713197
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132713197
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
CHGN
Motif
Other DBs
NCBI-GeneID:
132713197
NCBI-ProteinID:
XP_060551668
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MHSKRLKFFVRIVLIFSVISNVLFCLGSVYYISNCNGVVLKDMALTGTGGDQGDTPTWNN
INHRNVEMLPQWSKLNISAQFPYEEIKENIDTVCPDRPPQLVGRMNISGKVKPEDVFNVT
SLKMVRPGGHYIPACKQEEKVAIIVPYRDRENHLQILLYHLHTFLQKQQLHYAVFVVEMA
YPTQFNRGILANIGYLTSREILNFTCYIIHDVDLLPADDRNLYRCSDNPRHLSVSSSKYG
YKLPYGHYNGGVVAFTSTQFEKINGFSNAYFGWGKEDDDLHKRILKSGFKIDRPDAKIGD
YEEIVRQDIQDLTNPDNPMKDSLYLWAEKRFKNDGINSVLYQRIALEFLPLYTWVYVNTS
ELTVMKMIKHIDPGLKEAFARVKKA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcattcgaaacgattaaaatttttcgtaaggatagttttgatattttctgtgatatca
aatgttctgttctgtttaggaagtgtgtattacatttcaaactgtaatggtgtagtttta
aaagatatggcactgactggaactggtggtgaccagggcgacacaccaacatggaataat
attaatcatcggaatgttgagatgttaccgcaatggtccaaacttaacataagtgctcaa
tttccatatgaagagataaaagaaaacattgacacagtgtgtccagatcgtccaccacaa
cttgttggtaggatgaatataagtggtaaggtaaagccagaggatgtgttcaacgttacc
tcactgaaaatggttcgcccaggtggacattacatcccagcttgtaaacaggaggaaaag
gtcgctataatagtgccgtacagagacagagagaatcatttacagatattgctctatcac
ctgcacacgtttcttcagaaacaacaattacattacgccgtgtttgttgttgaaatggcg
tacccgacccagtttaatagaggtattttggcaaatattggttatcttacatctcgagag
attttgaatttcacgtgctatattatccacgacgttgatttattaccagcagacgataga
aacctttatagatgttccgacaatcccagacatctttctgtcagctccagtaaatatgga
tacaagttaccttatggccattacaatggtggagttgtagcattcacaagcacacagttt
gaaaaaattaacggattcagcaatgcttactttggttggggtaaagaagatgacgattta
cataaacggatcttaaagtctggttttaagattgacagacctgacgctaaaatcggagat
tatgaggaaatagttagacaggatattcaagatctcacgaatccagataacccaatgaag
gacagtttatacctgtgggctgaaaaaaggtttaagaatgacggaatcaatagcgttctt
tatcaaagaattgcgctcgaatttctaccattatatacgtgggtatatgtcaacacaagt
gaactgaccgtcatgaaaatgataaaacatatcgatcctggtctaaaagaagcgtttgca
cgtgtgaagaaagcctaa
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