Ruditapes philippinarum (Manila clam): 132714139
Help
Entry
132714139 CDS
T09557
Name
(RefSeq) small ribosomal subunit protein mS39-like
KO
K17659
pentatricopeptide repeat domain-containing protein 3
Organism
rphi
Ruditapes philippinarum (Manila clam)
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rphi03029
]
132714139
Mitochondrial biogenesis [BR:
rphi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
132714139
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rib_mS39_PPR
PPR_3
PPR_2
PPR_long
Mtf2
mRNA_stabil
Fer4_15
Motif
Other DBs
NCBI-GeneID:
132714139
NCBI-ProteinID:
XP_060552901
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MAASVRMRPSVFKSLYFHRTSCIVCRECQSSASTTTDAKSDGGPPVHIEREHVPRGQVNI
PKKKKRDSLSILKALASTVGRDPTAPKFVFLDDPALVPRKSEREKVLISKASGKRTARFM
VNEYRNTFNHGAAAPPVKAYQPDVTEYIYTDVCTDALRERIARREVDDAIEVYNRLLEEG
QDVSTEIKLSFLELLCVFGGKNPPPPLMPEERMVERIQIQNEALSFKIPMEFAEEVFHSL
PEKTVDAYNWIARGMAKAKLAKGLYFYQEMKKSEIPVYLGTYNELISYLSQQNVDRMKEV
ENYLTSMKKDGIAPNLETFHSVLRALEYGDRNYATFVPLVLAEMKVLKIEPTLQTFALVL
SALRPPKSDKPIPYKQGLHIVSDIQEIITYMRARGLDKYRVDHPKEHFLFEALKECKKFN
DIGVAEMLYNVREEMGYNYISTSFFEDENFFGTLLRMYALTENSDKLMEFYNKENTYNSS
LTFPVILAVLDNIETHSAYQYLPQLWEDLAYYVKSKWVDKDLLQKFLDMFGDYNDNQKLR
EDFVLIAKELFEESKTTRNPAIEFTEIGNRLTRIFVNHKNLDLAWESAMYIYQNGMQGFI
KGELLRDVLEMSILEKDVPKIMSFCKLPSEARDTMAAAQVISDNRNILIECLDDSEMKEL
EEVFEV
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgttagaatgcgaccttctgtatttaaaagtttatattttcacagaact
tcatgtattgtgtgtagagagtgtcaaagttcagcttccacaacaacagatgctaaatct
gatggtggaccacctgtacacattgaaagagagcatgtacctagaggacaagttaatatt
ccaaagaagaaaaaaagagattcactgtcaatattaaaagcattagcatcaacagttggc
agggacccaactgccccaaaatttgtatttttagatgatcctgcacttgttccacggaaa
tcagagagggagaaagtacttataagtaaggcatcaggaaagagaacagcccgcttcatg
gttaatgagtataggaatacatttaatcatggtgctgcagcgcctcctgtgaaggcatac
cagcctgatgtaacagagtatatttatacagatgtatgtactgatgcccttagagagaga
attgcaagaagagaggtggacgatgctatagaagtatataatagattgttagaagaaggt
caagatgtgagtacagaaataaaattatcatttttggagctgctgtgtgtgtttgggggt
aaaaacccaccgccgcctttgatgccagaagaaagaatggttgagaggatacaaatacaa
aatgaagcactatcatttaaaataccaatggaatttgctgaggaggttttccacagtttg
ccagagaagacagttgatgcttataattggatagccaggggaatggcaaaggccaaacta
gctaaagggttgtatttctaccaagaaatgaagaaatctgaaatcccagtatatctaggt
acatataatgagttgattagctacttgtctcagcagaatgttgatagaatgaaagaagtt
gagaactacttaacttcaatgaagaaggatggtattgctccaaacctagagacatttcac
agtgtactgagagctttagaatatggagatagaaattatgctacatttgttcctttagtt
cttgcagaaatgaaagttttaaaaatagagcccactttgcaaacatttgcattggtttta
tctgcactacgaccacctaagtctgacaaacctataccttacaaacaaggtcttcatatt
gtcagtgacatacaagaaatcataacgtatatgagagcacgagggcttgataaataccgg
gttgatcatccgaaagaacactttttatttgaagcactgaaggaatgtaaaaagtttaac
gatataggtgttgcggagatgttgtataatgtacgggaagagatgggctacaactacatc
tctacatcattctttgaggacgagaacttctttggtaccctgcttagaatgtatgctttg
acagagaactctgataaattgatggaattctacaataaagaaaatacttataatagttct
ttaacttttcctgttatactggcagttttagataacattgaaacacacagtgcataccag
tatttgccacagctttgggaagatctagcttactatgtaaaatctaaatgggtagataaa
gatttactgcagaaatttctagatatgtttggagattacaatgacaaccaaaagcttagg
gaagactttgttctaatagccaaggagttgtttgaggagagcaaaacaacaagaaaccct
gcaattgaatttactgagattggtaatcgactaacaagaatatttgtcaaccataagaac
ctggacttggcttgggagtctgcgatgtatatttatcagaatggaatgcaaggatttata
aagggtgaacttttgagagatgtgttagagatgtcaattttagagaaagatgttcctaag
ataatgagtttctgcaaactgcctagtgaagcaagagatacaatggcagctgcacaggtt
atatctgacaatagaaatattttgatagaatgccttgatgattctgagatgaaagaattg
gaagaagtctttgaggtatag
DBGET
integrated database retrieval system
