Ruditapes philippinarum (Manila clam): 132715635
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Entry
132715635 CDS
T09557
Name
(RefSeq) uncharacterized protein LOC132715635 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132715635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132715635
Enzymes [BR:
rphi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
132715635
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
132715635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
132715635
NCBI-ProteinID:
XP_060554649
LinkDB
All DBs
Position
Unknown
AA seq
676 aa
AA seq
DB search
MRDITNTYNNHRTGGSISKGGLTGTYCDKMLEPAQIKLEPVDIKQEPFPDSTTGNSPKKK
AGRPKKLKQEKITDHVTVKKKRKVDRFKGMPEEEVITRLLPDHLAPNLDIVIVGINPGLY
AAFVGHHYAGPGNHFWKCMYLSGLIPEPMNAMQDFKLLDYGIGFTNIVARTTRGSADLTR
KEIKEGAQILTEKLVKYKPKIAVFNGKGIYEVFVGHKNFHFGKQPDLLTGTETAVYVMPS
SSARCSQLPRAVDKVPFYEALKKFRDHLNGKLPDLNESEITFQDVVLKTAVKKEVKEEGE
NLYPGEMGTMPAGNQIPGDMTTLPPGKQMPDNMGNTAFAVDQHLAQFMAGPYQVIPHSVP
GTSSSQEISNQSSPMCMPNAGSSSGVSSPVQPVQVKKEPVDFDCPATTCQTTSSQPETIS
IGQLEVYNQSQVTSQNDSHLNNFLNGLYGMVNQVAVNNPADSRYGVVSHANISTNGPVQF
NDALRDIVREGSSEDLEGCASLEVLEKPPTSQQSQGKGAKASKSRKRKSKSAEESPAMSQ
TATFIPPPEQHYNPQSSSPSGNQQNSFQSYQPVPPFTNHLPHQNMPVSGYSNAYMSQMQG
QFNPHMGFNYMQPPQHSFTQLMNSGDQFMGMPPNGNTQNFPQHAANNGFPGQYPMEGQQP
NGFNPNMPIKQEKPDN
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgagggatattacaaatacttacaataatcaccggactgggggcagtatttctaagggg
ggtttgactggtacctattgtgacaaaatgttggaaccagcccagataaaacttgaacct
gttgacataaagcaggaaccattcccagacagcactacagggaattcaccaaagaagaaa
gctggtcgacctaagaagttgaaacaagagaagataacagatcatgtgacagtgaagaag
aagagaaaggttgacaggttcaagggcatgcccgaggaggaagtgataacaagattactg
ccagatcatctagctcctaaccttgatattgtcattgttggtataaacccaggactatat
gcagcctttgttggacatcattatgcgggaccaggaaatcatttctggaagtgtatgtat
ttatctggtctcatacctgagccaatgaatgctatgcaagatttcaagttactagattat
ggtattggttttacaaacattgttgccaggacaactagaggtagtgctgacctaacaagg
aaagaaattaaagaaggagcacagatattgacagagaaactagtcaagtataagccaaaa
atagcagtcttcaatgggaaaggtatttatgaggtgtttgtgggtcataagaacttccat
tttgggaaacagccagatctcttgacaggaactgaaacagctgtctatgtgatgccatca
tccagtgcaagatgcagtcagctgcctagagctgttgacaaagtacctttctatgaggct
ctaaaaaaatttagggatcatttgaatggcaagctgccagatctcaatgaatctgaaata
acatttcaagatgttgtcctaaaaactgcggttaagaaagaagttaaagaggagggagaa
aatctatatccaggagagatgggaaccatgcctgctgggaaccagatcccaggtgatatg
acaaccttgcctcctggtaaacagatgccagataatatgggaaatacagcatttgcagtg
gaccagcacttagctcagtttatggctggtccttatcaagttataccacacagtgttcca
ggcacaagttcatctcaggaaatatcaaatcagtctagtccaatgtgcatgccaaatgct
ggttccagttctggagtctcttctccagtacagcctgtacaagtgaaaaaggaaccagtg
gattttgactgtcctgcaacaacttgtcagacaacaagcagtcagccagaaactatttct
attggtcagttggaagtttataatcagtcacaagtgacatcacaaaatgatagccattta
aataatttcttaaatggtttatatggtatggttaaccaagttgctgtaaacaacccagca
gattcaagatatggtgttgtgagtcatgctaatatatctacaaatggaccagtacagttt
aacgatgcattacgtgacattgttcgtgaaggaagctcagaagatcttgaaggttgtgca
agtttagaagtgttagagaaacctccaactagtcaacaatctcagggaaaaggagcaaaa
gccagtaagtcaagaaagagaaaatcaaaatctgctgaagaatctcctgccatgtctcaa
actgccactttcataccacccccagagcagcattataatccccaatcttcatcaccatca
ggaaatcaacagaattcattccagtcatatcagccagtgcccccattcactaatcacttg
ccccatcaaaacatgcctgtatcaggttacagtaatgcgtacatgtctcaaatgcaagga
cagtttaacccacacatgggttttaattatatgcagccacctcagcatagttttacacag
ctcatgaacagtggggatcaattcatggggatgcctccaaatggaaacacacagaacttt
ccacagcacgcagcaaacaatggatttccaggccagtaccccatggaaggacaacaacca
aatgggtttaacccaaacatgcctataaaacaagaaaagcctgataattga
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