Ruditapes philippinarum (Manila clam): 132717095
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Entry
132717095 CDS
T09557
Name
(RefSeq) DNA polymerase kappa-like
KO
K03511
DNA polymerase kappa [EC:
2.7.7.7
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
132717095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132717095
Enzymes [BR:
rphi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
132717095
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
132717095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH
Ribosomal_L34e
Motif
Other DBs
NCBI-GeneID:
132717095
NCBI-ProteinID:
XP_060556477
LinkDB
All DBs
Position
Unknown
AA seq
1221 aa
AA seq
DB search
MEADKLLEDFEQQRDLSHTIVHIDMDAFYAAVEMRDDPSLKNKPMAVGGDNMLSTSNYHA
RKFGVRAAMPGFIGRKLCPELVIVPLNFEKYTSVSKQVKSIIAEYDANFCPMSLDEAYLD
LTEHLKKRLSMPVKERTFICRHSDYADSRSHCKCDLNEIKSEYAEEDITVDKLNEFFTKS
EHFQVVQQDTDSAKATNIDKEGKCVVCLKCKKVLPPFRLVTFGMSDEDTVNELRTRIEQK
TTLTASAGIAPNMMLAKVCSDKNKPNGQYKIEPNRETVMEFIKNLPTRKVSGIGKVSEAM
LNAVGVYTCTDLYEKRGLLYHLYSQISFNYFMRICLGIGSTTVERDSERKSMSTERTFSE
INRPADLNQKCEELCESLSEDLKSERLKGKTVSIKIKTVKFEVRTRAHTVRDYTNDYKDI
LYSAIELLKTEIQNCSPQPLRLRLMGVRMSNLLHESLCRGKKQNTIIGAFKRLSKPAEKL
DTNDGKFSVKDIGVVKAPDLAIDGLQSVSSIDTLSDNTDVNRETKEKLHLSHTNNMFGTF
SDKMNDNERNTDVDKAKSSFMSGMEDYNETNQLAKASGNFNVGVVNDTKSVDESKEPIEN
ASEKNVHVGIVNDSNGVEDVVEYVSKETKALTEEPVSVNTDTSEQYSDYRGDLEKDLQDG
PDLCKVLKEKNVMSENGASQEEGTSNLYSPNVRKTRSGVKRTPVSQTKQKKRKGRRGKDT
AVTYECPVCSLKILCESLNIFNEHVDNCLESDVSRKQDIDDDKTVIKGESYELKNGDDRI
ESGVNRTKSVGEDKTVIKQSDEPKSEDETMARSNRNKVNADICEIIKFDKSTGLPEKEVE
ADKTETEEKHISSLEEAETEREVTDLPVQKGDIETVIKCKDDVTSTTENHENIDSFTNTR
HVDTITVDEQVQQFSLKDKEMNVIDCSSGLLRSVVVNPVGELNKECKTYDVKSERVSVNK
EAASEHINESETVTERTRITNTSMKTKSESEHRDYENNVTVNDKLSGGEEIGTYNKSTHI
YRTEENEFDFTKNIQTKSSETNEMKSIDDQKMVDLESTHAIPISPKVIVNNSKEQCFEPE
RVCAGTSQQSDERYEMARSDAWVRKNLLQVSDEIEELNENSTMDDSDDDEEKEGSLLVCP
ICNIEQRSADLTEFNSHVDMCLSRRAISEILKEQKSKDSGSLKRNRAAETPGSAKSAKRR
KTAMPNISKPCRSIASFFQEK
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagacaagttattggaggattttgagcaacagagggatctaagtcacacgatt
gttcacatagacatggatgctttctacgctgcagtagagatgagagatgatccaagtttg
aaaaataaaccaatggctgttgggggtgacaacatgctgtcaacttcaaattatcatgca
cggaagtttggtgttcgagctgccatgccagggtttataggcagaaaactgtgccccgag
cttgttatagtgccgttaaactttgagaaatacacgtcagtcagcaaacaagtaaaatct
atcatcgcagaatatgatgcaaacttttgtcctatgtctttagatgaagcatatttggac
ctgaccgagcatttaaaaaaacgactatctatgccagtaaaagaaagaacatttatttgc
agacattccgattatgcagattccaggtcccattgtaaatgtgatttgaatgaaattaaa
agtgaatatgccgaggaagatattacggttgataaattaaatgagtttttcacaaaatct
gaacattttcaagtagttcaacaagacactgactcagctaaagcaacgaatattgataag
gaagggaagtgtgtggtgtgccttaaatgtaagaaagtgttacctccctttagacttgtg
acgtttggtatgagtgatgaagatactgttaacgagttgaggaccagaattgagcagaag
acaactcttacagccagcgcagggattgcaccgaacatgatgctggcaaaggtttgctcg
gataaaaacaaaccaaatggccagtacaagatagaacctaatagagaaactgtgatggag
tttatcaaaaatctgccgaccagaaaggtcagtggtattggcaaagtaagtgaggccatg
ttaaatgcagttggagtgtatacgtgtactgacctgtacgagaaacgagggttattatat
catctctactcacagatatctttcaactattttatgagaatatgtcttggtatcggatca
actactgttgagagggacagtgaaaggaaaagcatgagtacagaacgaacattttcagag
ataaacaggccagctgatttgaatcagaaatgtgaggaactgtgcgagagtctatctgaa
gatctcaaatctgaacgattaaagggtaaaacagtgtcaatcaagataaagacagtgaag
tttgaagtacggactcgtgcacacacagttcgagactacaccaatgactataaagatata
ttatactcagccatcgaactattgaaaactgagatccagaactgctctccacaacctttg
aggctaaggcttatgggtgtcaggatgtcaaatttactgcatgagagtttgtgtcgaggg
aagaagcagaacactatcattggagctttcaaacggctttcaaaacctgctgaaaaactg
gatacaaatgacggcaaatttagtgtaaaagatattggtgttgttaaagcaccagatctt
gctattgatggattacagtccgtaagttcaatagatacactttcggataatactgatgtt
aatagggagacaaaggaaaagttacatttgagtcatacaaataatatgtttggaactttt
tccgataaaatgaatgataatgaaagaaatacagatgttgacaaagcaaagagcagtttt
atgagtggtatggaagattataatgaaactaatcagcttgcaaaagctagtggaaatttt
aatgttggtgttgtaaatgatactaaaagtgtagatgaatcaaaggaaccgattgaaaat
gcttctgagaaaaatgtccatgttggtattgtaaatgatagtaatggtgttgaagatgtg
gttgaatatgtctctaaggagaccaaagctttaactgaagaacctgtctcagtaaataca
gatacaagtgaacaatatagtgattatagaggtgatctggagaaagatttacaagatggt
cctgacttgtgtaaagtactaaaagaaaaaaatgtgatgtcagaaaatggtgcatctcag
gaagaaggtacttcaaatctttattcaccaaatgttagaaaaactagaagtggtgtcaaa
aggacgccagtttcacaaactaaacaaaagaaaagaaaaggaaggagagggaaagataca
gcggttacctatgaatgtccagtatgttcacttaaaattctatgtgaaagtttaaacatc
ttcaatgaacatgttgataattgtcttgagagtgatgtaagtagaaaacaagatattgat
gatgacaaaactgtgataaaaggtgaatcttatgaattaaaaaatggtgatgacagaatt
gaaagtggtgtaaatagaactaaaagtgttggtgaagacaaaactgtgataaaacaatct
gatgaaccaaaaagtgaagatgaaacaatggcaagatctaatagaaacaaagtcaatgca
gatatatgtgaaattatcaaatttgataaatcaactggtttaccagaaaaagaagttgaa
gctgataaaactgaaacagaagaaaaacatatcagttctttagaggaagcagagactgaa
agagaagttacagacttgccagtacaaaaaggagatattgaaactgtcatcaaatgcaag
gatgacgttacatcaactactgaaaatcatgaaaatattgatagttttactaataccaga
catgtagatacaattacagttgatgaacaagttcagcaatttagtctcaaagacaaagaa
atgaatgtaattgattgttcaagtggacttttaaggtcagttgttgttaatcctgtaggt
gaattaaataaagaatgtaaaacgtatgatgttaaaagtgaaagagtcagtgttaataaa
gaagctgcttcagaacacataaatgaaagtgaaacggttactgaaagaactcgtataaca
aatactagcatgaaaaccaaatcagaaagtgaacacagagattatgaaaataatgtaaca
gtgaatgataaattatcaggaggtgaagaaattggaacatataataaaagtactcatatt
tatagaactgaagaaaatgagtttgatttcacaaaaaatatacagactaaaagttctgaa
acaaatgaaatgaaaagtatagatgaccaaaaaatggtagatttagaatcaacacatgca
attcctataagtcctaaagtgatagtaaacaatagtaaggaacaatgttttgaaccagaa
agggtttgtgctggtacaagtcagcagtcagatgaaagatatgagatggctaggtcagat
gcttgggtcaggaaaaatctgctacaagtgtctgatgaaatcgaagagctaaatgaaaac
agtaccatggatgattcagatgatgacgaggaaaaagaggggtcattactggtttgtcct
atatgtaacatagaacagagatcagctgacttgactgagtttaacagtcatgtagacatg
tgccttagtcgcagagctatatcagaaatacttaaggagcagaaaagtaaagatagtgga
tccttgaaaaggaacagggctgctgaaacaccagggtcagcaaaatcagcaaagcgacgt
aaaacagcaatgccaaatatttccaaaccatgcaggagtattgcttctttcttccaagaa
aaatag
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integrated database retrieval system
