KEGG   Ruditapes philippinarum (Manila clam): 132717376
Entry
132717376         CDS       T09557                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi03420  Nucleotide excision repair
rphi04120  Ubiquitin mediated proteolysis
rphi04141  Protein processing in endoplasmic reticulum
rphi04310  Wnt signaling pathway
rphi04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132717376
   04120 Ubiquitin mediated proteolysis
    132717376
  09124 Replication and repair
   03420 Nucleotide excision repair
    132717376
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    132717376
   04350 TGF-beta signaling pathway
    132717376
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rphi04121]
    132717376
   03400 DNA repair and recombination proteins [BR:rphi03400]
    132717376
Enzymes [BR:rphi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     132717376
Ubiquitin system [BR:rphi04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   132717376
  Multi subunit type E3
   SCF complex
    Ring finger protein
     132717376
   Cul2 complex
     132717376
   Cul3 complex
     132717376
   Cul4 complex
     132717376
   Cul7 complex
     132717376
   Cul8 complex
     132717376
   Cul9 complex
     132717376
DNA repair and recombination proteins [BR:rphi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      132717376
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      132717376
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 132717376
NCBI-ProteinID: XP_060556814
LinkDB
Position
Unknown
AA seq 111 aa
MAAAMDIDEEAQAGVSGDRAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQ
ANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 336 nt   +upstreamnt  +downstreamnt
atggccgctgctatggacattgacgaagaagctcaggccggtgtttctggagatagagca
ggaaagaaacgatttgaagttaaaaaatggaatgctgtagccttgtgggcatgggacata
gtggtggataactgtgccatctgcagaaatcatattatggatctgtgtattgagtgccaa
gcgaatcaagcttcagcaacaagtgaagagtgcaccgtggcttggggtgtctgtaatcac
gcattccatttccattgtatatcacgttggctgaagacacgtcaagtgtgtcccttagat
aatagggaatgggagtttcaaaagtatggtcactaa

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