KEGG   Ruditapes philippinarum (Manila clam): 132718605
Entry
132718605         CDS       T09557                                 
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
  KO
K03174  TNF receptor-associated factor 3
Organism
rphi  Ruditapes philippinarum (Manila clam)
Pathway
rphi04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:rphi00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    132718605
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF Sina_ZnF zf-C3HC4 TRAF3_RING CCDC39 CCDC22_CC zf-RING_UBOX CENP-F_leu_zip zf-C3HC4_2 DNA_repr_REX1B zf-C3HC4_4 ENOX1 ZapB_rel FKBP15 DegS DUF3829_2nd Snapin_Pallidin MIPOL1_C zf-TRAF_2
Other DBs
NCBI-GeneID: 132718605
NCBI-ProteinID: XP_060558302
LinkDB
Position
Unknown
AA seq 596 aa
MIYRIRITDEIVVVVCTNKSYLGQIYGTEKCVIFVFQDFSMSSDYSSIQSTPSGTPHFIR
LEPKHCCNFCKNVLRDSMQTVCGHRICKTCVEPLFDDKTEPITCPAGEEDCSVLFKSDIT
QDPSSRREIRDLLVSCEFVSFGCIDEIKWKALSNHVQTCKYQPVTCPNSGCNKRIPPKEK
KIHLKKYCEYKPEQCTFCKKFVPSKLMQSHIEDECTSVVMLCPYQCGSLKMTRVELNNHK
EICHMKPRECQYKCVGCTFMGTDEEVKNHLINDLNGHIQLTTDYAKKLGDQTLQCSRELQ
VVQSERDQLRAQVDNMKKEMTLMKNNFEKAMNLCKELKLKMVSVTERVIHLEKQLENTAK
KDIVERHDTDVRTMQVSLTQVRAQVVQLERLYLNEGRSGPGEISSAPELKRIIDKHDSQF
AQLDVQMAELDLRFQILETASYDGTLMWKLRDYARRKQDAVQGRTLSLYSQPFYTHRYGY
KMCARVYLNGDGMGKGSHMSLFFVVMRGEYDNLLPWPFQQKVTMTLLDQETGQCNLSDSF
RPDPTSSSFRKPTTDMNIASGCPLFVSHAILETPKYVRDDTIMIKFHVDLLNLNHP
NT seq 1791 nt   +upstreamnt  +downstreamnt
atgatttataggatcaggatcacagatgaaatagttgtggttgtttgtacgaataaatcg
tatttgggacaaatatatgggacagaaaagtgtgtgatttttgtttttcaagactttagt
atgtctagtgattactcatctattcagtcaactccttcgggaactccacattttattaga
ctagaacccaagcactgttgcaacttttgtaaaaatgttctccgagactcaatgcagaca
gtatgtggtcacagaatatgtaaaacttgtgttgaaccattgtttgatgataaaacagaa
ccaataacgtgtccagctggtgaagaagattgttcagttttattcaaaagtgatataact
caagatccaagtagtcgccgagaaattagagacctcctcgtgtcatgtgaatttgtgagc
tttggatgcatagatgaaataaaatggaaggcgttatctaatcatgttcagacttgcaag
tatcaaccagttacatgtccaaatagtggctgcaataaaagaatacccccgaaagaaaag
aaaattcatttaaagaagtattgcgagtacaagcccgaacaatgcacgttttgtaaaaag
tttgttccttcaaagctcatgcagagccacatagaagatgaatgcacatctgttgtcatg
ctgtgtccctatcaatgcggtagcctaaaaatgacgagagttgagctgaataatcacaag
gaaatatgccacatgaagcctagagaatgtcagtataaatgtgttggctgcacgttcatg
ggtacagatgaagaggtaaaaaatcacttaatcaatgacttgaacggacatatacaatta
acaactgattatgctaaaaaattgggggatcaaaccttgcaatgttcacgggaactccag
gtagtacaatcagaaagagatcagcttcgtgcacaggttgataatatgaaaaaagaaatg
acgctgatgaaaaacaattttgagaaggctatgaatttatgtaaggaattaaagttaaaa
atggtatcagtaacagagcgtgtaattcatctagagaagcaactagaaaatactgctaag
aaagacattgttgaacgtcatgatacagatgttcgaaccatgcaggtatctctgacacag
gttagggcacaagttgttcaacttgaaagattatatttaaatgaaggaagatcaggtccg
ggtgaaatctcatcagctccagagttaaagcgtataatagacaagcatgacagccaattt
gcacagttggatgttcagatggcagagcttgacctgagatttcagatcctggagacagca
agctacgatggtacactaatgtggaagttgagggattatgctcggagaaaacaagacgca
gttcaagggagaacactctcgttgtacagtcagccattttacacccacagatatggctat
aagatgtgtgctcgggtatatcttaacggagatggcatgggaaaaggaagtcacatgagt
ctgttctttgttgttatgagaggtgagtatgataacctgttgccatggccgttccagcag
aaggtaacgatgacacttcttgaccaggagacaggacagtgcaacctttctgactcgttt
agaccagatccaaccagtagcagttttagaaaaccaacaacagacatgaatatagcttct
ggatgtccactatttgtatctcatgcaattcttgaaacacctaagtatgttagagatgac
acaataatgatcaagtttcatgttgatctgttaaatctgaaccatccataa

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