Ruditapes philippinarum (Manila clam): 132719020
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Entry
132719020 CDS
T09557
Name
(RefSeq) beta-1,4-galactosyltransferase 4-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00052
Galactose metabolism
rphi00510
N-Glycan biosynthesis
rphi00513
Various types of N-glycan biosynthesis
rphi00514
Other types of O-glycan biosynthesis
rphi00515
Mannose type O-glycan biosynthesis
rphi00533
Glycosaminoglycan biosynthesis - keratan sulfate
rphi00601
Glycosphingolipid biosynthesis - lacto and neolacto series
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
132719020
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
132719020
00513 Various types of N-glycan biosynthesis
132719020
00515 Mannose type O-glycan biosynthesis
132719020
00514 Other types of O-glycan biosynthesis
132719020
00533 Glycosaminoglycan biosynthesis - keratan sulfate
132719020
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
132719020
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rphi01003
]
132719020
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rphi04131
]
132719020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rphi04147
]
132719020
Enzymes [BR:
rphi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
132719020
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
132719020
2.4.1.90 N-acetyllactosamine synthase
132719020
Glycosyltransferases [BR:
rphi01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
132719020
Membrane trafficking [BR:
rphi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132719020
Exosome [BR:
rphi04147
]
Exosomal proteins
Exosomal proteins of breast milk
132719020
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Motif
Other DBs
NCBI-GeneID:
132719020
NCBI-ProteinID:
XP_060558737
LinkDB
All DBs
Position
Unknown
AA seq
379 aa
AA seq
DB search
MTSVCQTQINSIEERNDIWNSRKLENCSVKQKTVHTTDTPAYNYTTYRNSSNGNFSLKLV
WPEKQNLAICKIKPKLLAGRIEMSSSVTAKDVMNAKAIAKVKYGGVYRPPDCRSSQNVAV
IIPYRDRPDQLKILVNHLHNMLQRQRVFYGIYVVEMALPVQFNRGILANVGFLTAGSIVN
YTCYIIHDVDLVPINDNNLYRCSEYGPKHMVTQNSAFENGKLPYSGYVGGVIAFTTLQYA
KINGFSNLYFGWGGEDDDMFKRIRARNMTLQRPPDHIGVFRALKHTQDSSNPPNPHREML
LNQAAYRIDIDGMSSINYNRKSLEFRTLYTWILVDCIEAELLEMYPFLRADSKLMSKKVK
QKRHHLTVIQSKDGEIREN
NT seq
1139 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgtttgtcagacacagattaactccatagaagagcgcaatgacatatggaat
agccgaaagttagaaaattgttccgtgaaacagaagaccgtacacacgactgatacccca
gcctataactatacaacatatagaaattcttcaaatggaaacttttcattaaaactagta
tggcctgaaaaacaaaatctcgcaatttgcaaaatcaaacctaaacttttggctggccga
attgaaatgtcctcatcagttacagcaaaagatgtcatgaatgcaaaggctatagcgaaa
gtaaagtatggtggagtttatagaccaccagattgtcgctcgtcacagaatgtagccgta
ataattccctatagagatcgtccggaccaattaaaaattttagttaatcatttacacaat
atgctacaaagacaaagagtgttttacggaatatatgttgtagaaatggccttacccgtt
cagtttaaccgcggtatcctagcaaacgttgggtttctaacagccggaagtatcgtgaat
tacacgtgctatatcattcatgatgtagaccttgtaccaataaatgacaacaatttatac
agatgtagtgagtacggaccaaaacatatggtcacacaaaattctgcatttgaaaatgga
aagcttccgtactctggatacgtgggtggggtaatagcatttactactttgcaatatgcc
aaaataaacgggttttccaacctctatttcggatggggaggtgaggatgacgatatgttt
aaaagaatccgtgctagaaacatgactcttcaacgccctccagatcatattggagtattc
agggctctaaaacacacacaagattcttccaatccacccaatccacatcgggaaatgtta
ctaaaccaagcggcatacagaattgatattgacggaatgtcctcaattaattacaaccgg
aagtctctcgaatttcgaactctctacacgtggattctcgtagactgtatcgaagccgag
cttttagaaatgtatccattcttaagagctgactcaaagttaatgtcaaagaaagtcaag
caaaaaagacaccatttaacagttatacagtcaaaagatggcgaaattagggagaatag
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