Ruditapes philippinarum (Manila clam): 132719919
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Entry
132719919 CDS
T09557
Name
(RefSeq) BRISC and BRCA1-A complex member 2-like
KO
K12173
BRCA1-A complex subunit BRE
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132719919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rphi04121
]
132719919
03036 Chromosome and associated proteins [BR:
rphi03036
]
132719919
03400 DNA repair and recombination proteins [BR:
rphi03400
]
132719919
Ubiquitin system [BR:
rphi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
132719919
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
BRISC complex
132719919
Chromosome and associated proteins [BR:
rphi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
132719919
DNA repair and recombination proteins [BR:
rphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
132719919
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE
Motif
Other DBs
NCBI-GeneID:
132719919
NCBI-ProteinID:
XP_060559859
LinkDB
All DBs
Position
Unknown
AA seq
381 aa
AA seq
DB search
MHENEILTLISPKISHQILQLLQDGYFGICGGKIKITDLNTSCTTLTAMSPGNCDRFKVV
IPFAGQTITWEVLFDCNFPEGPPDFIFGSEDLDFFPDINSLQSLVEWDYEDPCCLGQVIE
ELLYQYKKYQENIINGTHRLKFEYSSLVEDTDVKSEDVEIHVSRTENRMGPINFLMKLHV
DFARIPAYIIKLDPGEDAALLLVSFNSPEGTRITPQLYLSPRVERALGGSANLRIPGFPV
GSCLSEYVPDVTLLLKNKVDQIVQCYEKRKEYIAAFLSMFGRSILEYDAEGFTKVSFLFE
WHDFFFIINIELPTYFPKEQPFLTFQSIYHETKGKPYSETHQDDYPYSPRWSGLEMAERA
KTFILDNIGAFQKQSVKSCAT
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaaaatgaaattcttacattgatatctccaaagataagtcatcagatattacaa
ttacttcaagatggatattttggcatatgtggtggaaagattaagataacagatctaaat
acaagttgcacaactttgacagctatgagtccaggaaactgtgacagatttaaagttgtc
attccatttgctgggcagacaatcacttgggaggtgttatttgactgcaactttccagaa
ggacccccagattttatatttggatctgaagatcttgacttcttccctgatattaacagt
ttacagagtttagtggaatgggattatgaagatccttgctgtttgggacaggtgattgaa
gaattactttatcagtataaaaaatatcaggaaaatataataaatggaacacatcgttta
aagtttgagtacagttctttagtggaggatacagatgttaaatcagaagatgtggaaata
catgtgtcacgtacagagaacagaatgggacccattaactttttgatgaaactccatgta
gactttgcaagaataccagcctatataataaagcttgacccaggtgaagatgcagcttta
ttactggtatcatttaatagtcctgagggaactagaataacaccccagttatacctctca
ccaagagttgaaagagcacttggtggatcagctaatctcagaatcccagggttccctgtt
ggttcatgcctttcagaatatgttcctgatgttacactacttcttaaaaataaggttgac
cagattgttcagtgttatgaaaaaagaaaagaatacatagctgcattcttaagcatgttt
ggaaggtctatcctggaatatgatgctgaggggtttactaaagtttcatttctttttgag
tggcatgactttttcttcattataaacattgagttgcccacttattttccgaaggaacag
ccatttttaacatttcaatcaatttatcatgagactaaaggtaaaccttactcggaaacc
catcaagatgattatccctatagtcctagatggagtggactcgagatggctgaacgtgct
aagacattcatactggacaatataggtgccttccagaaacaatcagtcaaaagttgtgca
acctga
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integrated database retrieval system
