Ruditapes philippinarum (Manila clam): 132720106
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Entry
132720106 CDS
T09557
Name
(RefSeq) putative acyl-CoA synthetase YngI
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
rphi
Ruditapes philippinarum (Manila clam)
Pathway
rphi00130
Ubiquinone and other terpenoid-quinone biosynthesis
rphi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rphi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
132720106
Enzymes [BR:
rphi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
132720106
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Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
132720106
NCBI-ProteinID:
XP_060560075
LinkDB
All DBs
Position
Unknown
AA seq
561 aa
AA seq
DB search
MFTRSYIKVDGPPVTLKHQTFPEVIKHYAETKPDDESVVFVATDGTRECVKWLQLYQMSQ
IMAKVLIKIGIQKHEVVAINVRCCPEWLYATFGAMMAGAIPVSISFTYTDGSDLIALMKK
METCSLLILDPGADGINWNILRTLLDEYKADGKVKSQKMPYLRYVLGVRFDGHPELSNVL
GLRDLLEEDHCDVELPVVKPTDVCGLFQTSGSTGVPKLVTYIQQSSLKMFCESNVFELLN
PKYILFNDRPFNWGGGYPWSIFTGQTRVTLSGYCDPSKDRLSHVIDVIVKERCSMIFALP
PLMHELIKRQRDLPDDWPIEGILTAGQPLTKQLADCVGKACKFLLCTYAGTEFGGATEAN
ITDPNDFIEYGCGKPFNIPGLEIKIVDENAEIVPVNQRGEIYIRSDDMFTGYFNDPEKTK
AVFNEDGWYKTDDIGRMTEDGEFFVEGRKSNMIISGGFNVAPEILENVMKTFPGVDSVII
VPVPDDVYYQVLCACIVKKEDCEISEENVRKYCREYHADKPGLFTVLPKYYMFFESFPET
RSGKIHRKELEKIALQRFVSE
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaagaagttacattaaggtggatggacctcctgttacactaaaacatcaaact
ttcccggaggtgatcaaacattatgcagagacaaaacctgacgatgagtctgttgtcttt
gtagcaactgacggaactcgagaatgtgtcaagtggttacagctgtaccagatgtctcaa
ataatggcgaaagtactgataaaaattgggattcagaagcacgaggttgttgctatcaac
gtccgttgttgtccagagtggttatatgctacatttggtgccatgatggctggggccatt
ccagtcagtatatccttcacgtatactgacggcagtgatcttatcgctcttatgaaaaag
atggaaacttgttcgctgcttattcttgatcctggtgcagacggtattaattggaatatc
cttcgtacacttcttgacgagtacaaagctgacggtaaagtaaaaagccaaaaaatgcca
tacctaagatatgttctaggggtaaggtttgatggacacccagaattatctaatgtctta
ggcttacgagaccttttagaggaggaccattgtgatgtagaacttcccgtcgttaagcca
accgatgtatgtggactcttccagacatctggaagcacaggtgtaccaaaacttgttaca
tatattcaacaatcatctttaaagatgttttgtgaatccaatgttttcgaacttttaaat
ccgaaatatatcctttttaacgacagaccattcaactggggtggtgggtatccatggtca
atatttacgggtcaaacaagggtgacgttatctgggtattgcgatccgtcaaaggacaga
ctttcgcatgtgattgacgtaattgtgaaagaaaggtgttccatgatatttgctctacca
cctttgatgcatgagcttataaaaagacagagagatttgccagatgactggccgattgaa
ggtatactgactgctggacagcctcttactaagcaactagctgactgtgttggaaaggct
tgcaaattccttctgtgtacgtacgcaggcactgaatttggaggtgcgactgaagcaaat
atcactgatccgaatgatttcatcgagtatggatgcggaaaaccttttaatattcctgga
ctggaaattaaaatagtggacgagaacgccgaaatagtacccgtcaatcagagaggagaa
atatatattcggtcggacgacatgtttacgggctatttcaatgatccggagaaaacaaaa
gctgtgttcaacgaagacggatggtataaaacggacgatatcgggaggatgaccgaagat
ggtgaattctttgtagagggtcgaaagtccaatatgattatttcagggggatttaacgtt
gctccagagattcttgagaatgttatgaaaactttcccaggtgtagattccgtcattatc
gtaccagttccggatgacgtttactatcaagtgttgtgtgcttgtattgttaaaaaagaa
gattgcgaaataagcgaagaaaatgtccgaaagtattgccgcgagtatcacgcagacaaa
ccgggacttttcacagttcttccgaaatactacatgtttttcgaatcgtttcctgaaact
agaagtggaaaaattcatcggaaggagttagaaaagatagcacttcaacgattcgtcagt
gaataa
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