Ruditapes philippinarum (Manila clam): 132720377 Help Entry 132720377         CDS       T09557                                  Name (RefSeq) protein toll-like   KO K10159   toll-like receptor 2 Organism rphi  Ruditapes philippinarum (Manila clam) Pathway rphi04145   Phagosome rphi04620   Toll-like receptor signaling pathway Brite KEGG Orthology (KO) [BR:rphi00001]  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     132720377  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     132720377  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:rphi04131]     132720377   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:rphi04147]     132720377    04054 Pattern recognition receptors [BR:rphi04054]     132720377    04090 CD molecules [BR:rphi04090]     132720377    00536 Glycosaminoglycan binding proteins [BR:rphi00536]     132720377 Membrane trafficking [BR:rphi04131]  Endocytosis   Phagocytosis    Toll-like receptors     132720377 Exosome [BR:rphi04147]  Exosomal proteins   Exosomal proteins of breast milk    132720377 Pattern recognition receptors [BR:rphi04054]  Membrane-bound pattern recognition receptors   Toll-like receptors    132720377 CD molecules [BR:rphi04090]  Proteins   132720377 Glycosaminoglycan binding proteins [BR:rphi00536]  Hyaluronan   Cell surface receptors    132720377 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TIR_2 TIR LRR_8 LRR_4 CAP12-PCTIR_TIR LRRCT LRR_14 LRR_R13L1-DRL21 ThsB_TIR LRR_9 Motif Other DBs NCBI-GeneID:  132720377 NCBI-ProteinID:  XP_060560489 LinkDB All DBs Position Unknown AA seq 696 aa AA seqDB search MAMVILVTLLLFMRCSGANDLAIIEKTLYEAFECSYDNSSPTLKIENGVTDEQIKECLKT HKFTERLMLWNSHLSNIPKYLNILRYLVHLDLSNNDITEVAFEGIEDICQQLTYLSLDNN DIEALRKGDLDCLQSLQYLYLGNNKLKFVENGTFSVRMKSIRYIYLVNNSLTVLDFSLLS RLKLSDDVRLTVNASRNFITGITNSANITIQNFTSKTSVFIVATHNNITTVNIHYYFEML NITNPFQLYRMGNSGFDVRFNPFICDCAMFPLADALRRFRYMDPDNPLFSVTCGTPSSLE GMMLRKVPKNQFNCSVEVNCPNKCICSKTAALDLVTIHCDGNYFKNNIPMTCPVAGKINI NIKSNKLTKVSSRAYLSNVSQFDVSQCAITTIETSFVDMIQNTSFDALLFNDNGLETIPK SFKNFNFSNGQVLALDGNPFNCDCHTRWMKSWLHSNKKHILRQNNIRCATGPGKNKPIIE VPDNLFICQTLTDTDELLIVIGSVIFVALIFIILFYKSKNIQVFMISHFDICKYCCRRRK LRKLSFDIFIPHSCEDDDVIKKIVDYLENHDPPYSVCIGEKNFKPGLTISENILDAIESS QTTLLVISNNFLRSTWCNMEFREAHMRFLRDRNINMVLIVLEELDTKLICKELKIYMDTH VYIQYTDNQFWAKLLQSLPIITDPPSFTDESPLFSN NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt atggccatggtcattttagtaacacttcttttgttcatgaggtgttccggagcaaatgat ttggctatcattgagaagacattgtatgaagcatttgaatgcagctatgataacagttcg ccgacattgaaaatagaaaatggtgttactgatgaacaaattaaagaatgtttaaagacc cataaattcactgagcgattgatgctatggaatagtcatttgagtaatattccaaagtat ttaaacatattgagatatcttgtgcatttagatttatcaaacaacgatataacggaagta gcatttgaaggaatcgaagacatttgtcaacaactaacatatctttcactagacaataat gacatcgaggccttacgaaaaggggatcttgattgcttacaatcccttcaatatctttac cttggaaataataagttaaaatttgtggaaaatggaacattcagtgtaagaatgaagagt ataagatacatatatttagttaataatagtctcactgttttagattttagtttgctaagt cggctgaaactgtctgacgatgtgaggctaacagttaatgcttcgcgaaattttattaca ggaatcactaattcagcgaatataacgatacaaaattttacatcaaaaacgtctgtgttt attgtagcaactcacaataatatcacaactgttaacatacactattacttcgaaatgtta aatattacaaatccttttcaattatatcgaatggggaactccgggttcgacgtgcgtttt aacccttttatttgtgactgtgcaatgtttcctttagcagacgctcttagaaggttcagg tacatggatccagacaaccctttattttcagtgacatgtggaactccttcaagtcttgaa ggaatgatgctacgcaaagttccaaaaaatcagtttaattgctctgttgaggtaaattgc ccaaataagtgtatatgtagcaaaacagcagcgcttgacctcgtgaccatccactgtgat ggaaattattttaaaaataacattccaatgacatgtccagttgctggaaagattaacatc aatattaaatctaacaaattgacaaaagtctcttccagagcatatcttagtaatgtttca caatttgatgtatctcagtgtgcaattacaaccattgaaacatcgtttgttgacatgata caaaatacctctttcgatgctttattattcaatgacaatggacttgaaacgataccaaaa tcgtttaaaaactttaatttcagcaatggtcaggtcttagctttggatggcaatccattt aattgtgattgccatacacgttggatgaaatcttggctgcattcgaacaaaaagcacatt ttacgacagaataacatcagatgcgcaactgggccaggcaaaaacaaaccaataattgaa gtaccagacaatttgtttatttgccaaactttaacagacaccgacgaattacttattgtg attgggtcagtaatatttgtcgctcttatatttataatattgttttataaatctaagaat atacaagtgttcatgatatcccattttgatatatgcaagtattgctgccgaaggagaaaa ctacgcaagttgtcattcgatatcttcattcctcattcatgtgaggacgatgatgttatt aaaaagattgttgactatcttgagaaccacgatccaccatatagtgtatgtattggtgag aaaaactttaaaccaggtctaacaatatctgaaaatatactggatgccattgaatccagt caaacaactttgcttgtcatttctaataatttcctgagaagcacgtggtgtaacatggag tttcgtgaagctcacatgaggtttctgagagacaggaatattaatatggtgttaattgtg ttagaggaattagacaccaaacttatttgcaaggagttaaaaatttatatggatacgcat gtttacatccagtacacagacaaccagttttgggccaaacttttgcaaagccttcccatt ataactgatcctccgtcttttactgacgaatcgccgcttttttcaaattag

DBGET integrated database retrieval system